Detail information of GWHGAAEX013626/evm.TU.scaffold_51.15
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1573 | 1.00E-158 | Aldehyde reductase |
| nr | gi|743799520|ref|XP_010925498.1| | 0 | PREDICTED: probable inositol oxygenase isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q5Z8T3|MIOX_ORYSJ | 5.00E-171 | Probable inositol oxygenase |
| trEMBL | tr|M0VCS6|M0VCS6_HORVD | 4.00E-176 | Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_22651.1} |
| TAIR | AT4G26260 | 1.00E-158 | myo-inositol oxygenase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000057 | 657330 | 661315 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013626
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05153.14 | MIOX | 46 | 296 | 9.30E-123 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00469 | MIOX | Metabolic pathways | map01100 |
| Ascorbate and aldarate metabolism | map00053 | ||
| Inositol phosphate metabolism | map00562 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0019310 | Biological Process | inositol catabolic process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0050113 | Molecular Function | inositol oxygenase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 51.450 |
| SRR2545915 | Juvenile tuber | 35.280 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.430 |
| SRR5643514 | five period of Gastrodia elata | 24.070 | |
| SRR5643515 | five period of Gastrodia elata | 24.040 | |
| SRR5643524 | five period of Gastrodia elata | 24.170 | |
| SRR5643525 | five period of Gastrodia elata | 27.740 | |
| SRR5643528 | five period of Gastrodia elata | 39.800 | |
| SRR5643658 | five period of Gastrodia elata | 55.160 | |
| SRR5643659 | five period of Gastrodia elata | 12.690 | |
| SRR5643660 | five period of Gastrodia elata | 14.600 | |
| SRR5643661 | five period of Gastrodia elata | 11.800 | |
| SRR5643662 | five period of Gastrodia elata | 13.870 | |
| SRR5643663 | five period of Gastrodia elata | 12.760 | |
| SRR5643664 | five period of Gastrodia elata | 12.120 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 27.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 20.140 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 29.900 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.410 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 33.620 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 37.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 31.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.470 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 41.040 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 47.510 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 37.050 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 37.050 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.68 |
| Juven | Juvenile tuber | 12.74 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 55.83 | |
| Mother_Juven | Mother tuber of Juvenile | 12.52 |