Detail information of GWHGAAEX013628/evm.TU.scaffold_51.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695042535|ref|XP_009408926.1|4.62E-45PREDICTED: probable WRKY transcription factor 50 isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8VWQ5|WRK50_ARATH3.00E-35Probable WRKY transcription factor 50
trEMBLtr|M0TG56|M0TG56_MUSAM2.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P09680_001}
TAIRAT5G261707.00E-35WRKY DNA-binding protein 50

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000057694998696444-
Transcript Sequence

Network for GWHGAAEX013628

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY1051627.40E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms109.910
SRR2545915Juvenile tuber98.010
SRP108465SRR5643513five period of Gastrodia elata41.250
SRR5643514five period of Gastrodia elata161.610
SRR5643515five period of Gastrodia elata92.280
SRR5643524five period of Gastrodia elata149.410
SRR5643525five period of Gastrodia elata79.510
SRR5643528five period of Gastrodia elata225.410
SRR5643658five period of Gastrodia elata48.530
SRR5643659five period of Gastrodia elata133.730
SRR5643660five period of Gastrodia elata82.690
SRR5643661five period of Gastrodia elata88.420
SRR5643662five period of Gastrodia elata132.430
SRR5643663five period of Gastrodia elata72.350
SRR5643664five period of Gastrodia elata174.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_187.650
SRR6049655Rhizomagastrodiae_C368-T10_good_186.670
SRR6049656Rhizomagastrodiae_C368-T07_good_181.760
SRR6049657Rhizomagastrodiae_C368-T07_good_173.860
SRR6049658Rhizomagastrodiae_C368-T04_good_183.920
SRR6049659Rhizomagastrodiae_C368-T04_good_1121.060
SRR6049660Rhizomagastrodiae_C368-T01_good_1102.090
SRR6049661Rhizomagastrodiae_C368-T04_good_143.430
SRR6049662Rhizomagastrodiae_C368-T01_good_1130.880
SRR6049663Rhizomagastrodiae_C368-T01_good_1255.280
SRR6049664Rhizomagastrodiae_C368-T10_good_1112.540
SRR6049665Rhizomagastrodiae_C368-T10_good_1112.540
SRP279888GastroGastrodia elata tuber 100.53
JuvenJuvenile tuber43.89
Mother_GastroMother tuber of Gastrodia elata 548.01
Mother_JuvenMother tuber of Juvenile 160.82