Detail information of GWHGAAEX013632/evm.TU.scaffold_51.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG09559.00E-78PHD finger protein BR140/LIN-49
nrgi|695043326|ref|XP_009409350.1|1.07E-97PREDICTED: protein Jade-1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9C5X4|ATX1_ARATH3.00E-19Histone-lysine N-methyltransferase ATX1
trEMBLtr|M0TH81|M0TH81_MUSAM4.00E-98Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P13440_001}
TAIRAT3G147409.00E-78RING/FYVE/PHD zinc finger superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005714609681462620-
Transcript Sequence

Network for GWHGAAEX013632

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00628.28PHD661166.00E-12
PF13832.5zf-HC5HC2H_21262362.20E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.420
SRR2545915Juvenile tuber1.220
SRP108465SRR5643513five period of Gastrodia elata10.630
SRR5643514five period of Gastrodia elata7.760
SRR5643515five period of Gastrodia elata4.430
SRR5643524five period of Gastrodia elata7.300
SRR5643525five period of Gastrodia elata0.490
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.330
SRR5643659five period of Gastrodia elata2.660
SRR5643660five period of Gastrodia elata1.780
SRR5643661five period of Gastrodia elata1.870
SRR5643662five period of Gastrodia elata0.840
SRR5643663five period of Gastrodia elata2.170
SRR5643664five period of Gastrodia elata0.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.260
SRR6049655Rhizomagastrodiae_C368-T10_good_18.060
SRR6049656Rhizomagastrodiae_C368-T07_good_114.960
SRR6049657Rhizomagastrodiae_C368-T07_good_16.400
SRR6049658Rhizomagastrodiae_C368-T04_good_15.750
SRR6049659Rhizomagastrodiae_C368-T04_good_12.490
SRR6049660Rhizomagastrodiae_C368-T01_good_15.930
SRR6049661Rhizomagastrodiae_C368-T04_good_18.930
SRR6049662Rhizomagastrodiae_C368-T01_good_114.960
SRR6049663Rhizomagastrodiae_C368-T01_good_19.520
SRR6049664Rhizomagastrodiae_C368-T10_good_118.790
SRR6049665Rhizomagastrodiae_C368-T10_good_118.790
SRP279888GastroGastrodia elata tuber 0.60
JuvenJuvenile tuber2.75
Mother_GastroMother tuber of Gastrodia elata 0.43
Mother_JuvenMother tuber of Juvenile 0.31