Detail information of GWHGAAEX013633/evm.TU.scaffold_51.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672138945|ref|XP_008793244.1|5.92E-116PREDICTED: tetraspanin-2 [Phoenix dactylifera]
Swissprottr|Q9ZUN5|TET2_ARATH4.00E-96Tetraspanin-2
trEMBLtr|A9PAZ7|A9PAZ7_POPTR4.00E-103Senescence-associated family protein {ECO:0000313|EMBL:EEE91818.1}
TAIRAT2G195801.00E-95tetraspanin2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005715447511551980-
Transcript Sequence

Network for GWHGAAEX013633

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00335.19Tetraspannin62446.70E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.060
SRR2545915Juvenile tuber61.160
SRP108465SRR5643513five period of Gastrodia elata163.120
SRR5643514five period of Gastrodia elata185.890
SRR5643515five period of Gastrodia elata146.040
SRR5643524five period of Gastrodia elata170.070
SRR5643525five period of Gastrodia elata312.280
SRR5643528five period of Gastrodia elata219.800
SRR5643658five period of Gastrodia elata326.140
SRR5643659five period of Gastrodia elata151.420
SRR5643660five period of Gastrodia elata133.680
SRR5643661five period of Gastrodia elata155.370
SRR5643662five period of Gastrodia elata120.260
SRR5643663five period of Gastrodia elata168.330
SRR5643664five period of Gastrodia elata139.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1114.680
SRR6049655Rhizomagastrodiae_C368-T10_good_1169.430
SRR6049656Rhizomagastrodiae_C368-T07_good_1121.770
SRR6049657Rhizomagastrodiae_C368-T07_good_1116.750
SRR6049658Rhizomagastrodiae_C368-T04_good_192.210
SRR6049659Rhizomagastrodiae_C368-T04_good_190.170
SRR6049660Rhizomagastrodiae_C368-T01_good_1109.800
SRR6049661Rhizomagastrodiae_C368-T04_good_198.870
SRR6049662Rhizomagastrodiae_C368-T01_good_1106.710
SRR6049663Rhizomagastrodiae_C368-T01_good_1105.810
SRR6049664Rhizomagastrodiae_C368-T10_good_1136.710
SRR6049665Rhizomagastrodiae_C368-T10_good_1136.710
SRP279888GastroGastrodia elata tuber 92.63
JuvenJuvenile tuber116.42
Mother_GastroMother tuber of Gastrodia elata 78.03
Mother_JuvenMother tuber of Juvenile 57.80