Detail information of GWHGAAEX013636/evm.TU.scaffold_51.33
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|256377834|ref|YP_003101494.1| | 4.00E-27 | serine/threonine protein kinase [Actinosynnema mirum DSM 43827] |
| KOG | KOG0583 | 0 | Serine/threonine protein kinase |
| nr | gi|460369899|ref|XP_004230794.1| | 0 | PREDICTED: serine/threonine-protein kinase SRK2E [Solanum lycopersicum] |
| Swissprot | tr|Q75H77|SAPKA_ORYSJ | 0 | Serine/threonine-protein kinase SAPK10 |
| trEMBL | tr|K4B344|K4B344_SOLLC | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g108280.2.1} |
| TAIR | AT4G33950 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000057 | 1714663 | 1732406 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013636
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 23 | 279 | 1.90E-70 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_OST1L |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14498 | SNRK2 | MAPK signaling pathway - plant | map04016 |
| Plant hormone signal transduction | map04075 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 136.330 |
| SRR2545915 | Juvenile tuber | 172.950 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 188.610 |
| SRR5643514 | five period of Gastrodia elata | 138.400 | |
| SRR5643515 | five period of Gastrodia elata | 172.040 | |
| SRR5643524 | five period of Gastrodia elata | 124.640 | |
| SRR5643525 | five period of Gastrodia elata | 213.880 | |
| SRR5643528 | five period of Gastrodia elata | 139.800 | |
| SRR5643658 | five period of Gastrodia elata | 153.460 | |
| SRR5643659 | five period of Gastrodia elata | 204.640 | |
| SRR5643660 | five period of Gastrodia elata | 252.150 | |
| SRR5643661 | five period of Gastrodia elata | 202.130 | |
| SRR5643662 | five period of Gastrodia elata | 237.890 | |
| SRR5643663 | five period of Gastrodia elata | 295.630 | |
| SRR5643664 | five period of Gastrodia elata | 296.990 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 126.420 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 151.840 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 109.150 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 113.490 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 94.760 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 95.890 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 108.430 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 98.780 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 108.420 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 113.400 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 130.810 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 130.810 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 326.36 |
| Juven | Juvenile tuber | 462.85 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 194.13 | |
| Mother_Juven | Mother tuber of Juvenile | 197.33 |