Detail information of GWHGAAEX013641/evm.TU.scaffold_51.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|407462934|ref|YP_006774251.1|1.00E-1050S ribosomal protein L31e [Candidatus Nitrosopumilus koreensis AR1]
KOGKOG08931.00E-6360S ribosomal protein L31
nrgi|568858743|ref|XP_006482903.1|2.64E-72PREDICTED: 60S ribosomal protein L31-like [Citrus sinensis]
Swissprottr|Q9M573|RL31_PERFR2.00E-6660S ribosomal protein L31
trEMBLtr|A0A061DVL1|A0A061DVL1_THECC1.00E-70Ribosomal protein L31e family protein {ECO:0000313|EMBL:EOX96720.1}
TAIRAT5G567101.00E-63Ribosomal protein L31e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005720644992070251-
Transcript Sequence

Network for GWHGAAEX013641

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01198.18Ribosomal_L31e13942.10E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02910RP-L31e, RPL31 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms289.600
SRR2545915Juvenile tuber330.810
SRP108465SRR5643513five period of Gastrodia elata608.530
SRR5643514five period of Gastrodia elata615.430
SRR5643515five period of Gastrodia elata549.080
SRR5643524five period of Gastrodia elata595.890
SRR5643525five period of Gastrodia elata460.690
SRR5643528five period of Gastrodia elata469.910
SRR5643658five period of Gastrodia elata388.340
SRR5643659five period of Gastrodia elata526.540
SRR5643660five period of Gastrodia elata550.700
SRR5643661five period of Gastrodia elata603.170
SRR5643662five period of Gastrodia elata433.760
SRR5643663five period of Gastrodia elata433.230
SRR5643664five period of Gastrodia elata415.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1449.330
SRR6049655Rhizomagastrodiae_C368-T10_good_1311.310
SRR6049656Rhizomagastrodiae_C368-T07_good_1553.630
SRR6049657Rhizomagastrodiae_C368-T07_good_1421.640
SRR6049658Rhizomagastrodiae_C368-T04_good_1498.790
SRR6049659Rhizomagastrodiae_C368-T04_good_1408.430
SRR6049660Rhizomagastrodiae_C368-T01_good_1472.970
SRR6049661Rhizomagastrodiae_C368-T04_good_1433.370
SRR6049662Rhizomagastrodiae_C368-T01_good_1635.290
SRR6049663Rhizomagastrodiae_C368-T01_good_1578.740
SRR6049664Rhizomagastrodiae_C368-T10_good_1766.030
SRR6049665Rhizomagastrodiae_C368-T10_good_1766.030
SRP279888GastroGastrodia elata tuber 553.69
JuvenJuvenile tuber316.88
Mother_GastroMother tuber of Gastrodia elata 396.57
Mother_JuvenMother tuber of Juvenile 250.04