Detail information of GWHGAAEX013642/evm.TU.scaffold_51.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108759226|ref|YP_633053.1|4.00E-12GrxC family glutaredoxin [Myxococcus xanthus DK 1622]
KOGKOG17524.00E-40Glutaredoxin and related proteins
nrgi|388496262|gb|AFK36197.1|1.46E-43unknown [Lotus japonicus]
Swissprottr|Q6K953|GRXC4_ORYSJ1.00E-40Glutaredoxin-C4, chloroplastic (Precursor)
trEMBLtr|I3S7F5|I3S7F5_LOTJA5.00E-44Uncharacterized protein {ECO:0000313|EMBL:AFK36197.1}
TAIRAT5G403704.00E-40Glutaredoxin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005721852162248906+
Transcript Sequence

Network for GWHGAAEX013642

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00462.23Glutaredoxin13755.00E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0009055Molecular Functionelectron carrier activity
GO:0015035Molecular Functionprotein disulfide oxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms229.430
SRR2545915Juvenile tuber203.870
SRP108465SRR5643513five period of Gastrodia elata147.160
SRR5643514five period of Gastrodia elata166.510
SRR5643515five period of Gastrodia elata147.980
SRR5643524five period of Gastrodia elata161.220
SRR5643525five period of Gastrodia elata178.990
SRR5643528five period of Gastrodia elata216.510
SRR5643658five period of Gastrodia elata186.470
SRR5643659five period of Gastrodia elata136.700
SRR5643660five period of Gastrodia elata134.080
SRR5643661five period of Gastrodia elata151.030
SRR5643662five period of Gastrodia elata159.200
SRR5643663five period of Gastrodia elata155.390
SRR5643664five period of Gastrodia elata169.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1161.350
SRR6049655Rhizomagastrodiae_C368-T10_good_1212.050
SRR6049656Rhizomagastrodiae_C368-T07_good_1160.580
SRR6049657Rhizomagastrodiae_C368-T07_good_1133.800
SRR6049658Rhizomagastrodiae_C368-T04_good_1137.310
SRR6049659Rhizomagastrodiae_C368-T04_good_1133.560
SRR6049660Rhizomagastrodiae_C368-T01_good_1118.810
SRR6049661Rhizomagastrodiae_C368-T04_good_1127.000
SRR6049662Rhizomagastrodiae_C368-T01_good_1168.270
SRR6049663Rhizomagastrodiae_C368-T01_good_1147.480
SRR6049664Rhizomagastrodiae_C368-T10_good_1221.470
SRR6049665Rhizomagastrodiae_C368-T10_good_1221.470
SRP279888GastroGastrodia elata tuber 182.41
JuvenJuvenile tuber172.47
Mother_GastroMother tuber of Gastrodia elata 133.71
Mother_JuvenMother tuber of Juvenile 145.95