Detail information of GWHGAAEX013645/evm.TU.scaffold_51.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428223912|ref|YP_007108009.1|6.00E-52cytochrome P450 [Geitlerinema sp. PCC 7407]
KOGKOG01570Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nrgi|695061723|ref|XP_009419306.1|0PREDICTED: cytochrome P450 90D2-like isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q94IW5|C90D2_ORYSJ0Cytochrome P450 90D2
trEMBLtr|I1HCZ1|I1HCZ1_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G05980.1}
TAIRAT3G137300cytochrome P450, family 90, subfamily D, polypeptide 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005724929822498029-
Transcript Sequence

Network for GWHGAAEX013645

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p450314464.90E-48
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP90D1

KEGG pathway

KO Enzyme pathway mapID
K12638CYP90D1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Brassinosteroid biosynthesismap00905

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
GO:0005506Molecular Functioniron ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.270
SRR2545915Juvenile tuber0.300
SRP108465SRR5643513five period of Gastrodia elata2.470
SRR5643514five period of Gastrodia elata14.340
SRR5643515five period of Gastrodia elata6.330
SRR5643524five period of Gastrodia elata14.760
SRR5643525five period of Gastrodia elata19.670
SRR5643528five period of Gastrodia elata23.900
SRR5643658five period of Gastrodia elata24.720
SRR5643659five period of Gastrodia elata0.480
SRR5643660five period of Gastrodia elata0.560
SRR5643661five period of Gastrodia elata0.390
SRR5643662five period of Gastrodia elata2.340
SRR5643663five period of Gastrodia elata0.560
SRR5643664five period of Gastrodia elata0.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.830
SRR6049655Rhizomagastrodiae_C368-T10_good_10.810
SRR6049656Rhizomagastrodiae_C368-T07_good_11.020
SRR6049657Rhizomagastrodiae_C368-T07_good_10.450
SRR6049658Rhizomagastrodiae_C368-T04_good_10.490
SRR6049659Rhizomagastrodiae_C368-T04_good_10.580
SRR6049660Rhizomagastrodiae_C368-T01_good_11.360
SRR6049661Rhizomagastrodiae_C368-T04_good_10.520
SRR6049662Rhizomagastrodiae_C368-T01_good_14.020
SRR6049663Rhizomagastrodiae_C368-T01_good_13.060
SRR6049664Rhizomagastrodiae_C368-T10_good_11.540
SRR6049665Rhizomagastrodiae_C368-T10_good_11.540
SRP279888GastroGastrodia elata tuber 0.96
JuvenJuvenile tuber1.12
Mother_GastroMother tuber of Gastrodia elata 9.50
Mother_JuvenMother tuber of Juvenile 11.84