Detail information of GWHGAAEX013652/evm.TU.scaffold_51.65
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|182677130|ref|YP_001831276.1| | 4.00E-43 | chaperone protein DnaJ [Beijerinckia indica subsp. indica ATCC 9039] |
| KOG | KOG0713 | 0 | Molecular chaperone (DnaJ superfamily) |
| nr | gi|695073157|ref|XP_009383732.1| | 0 | PREDICTED: dnaJ homolog subfamily B member 11-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9LZK5|DNJ19_ARATH | 0 | DnaJ protein ERDJ3B (Precursor) |
| trEMBL | tr|M0RS29|M0RS29_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P13990_001} |
| TAIR | AT3G62600 | 0 | DNAJ heat shock family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000057 | 3138368 | 3162748 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013652
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00226.30 | DnaJ | 26 | 87 | 6.00E-28 |
| PF01556.17 | DnaJ_C | 136 | 326 | 4.30E-35 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09517 | DNAJB11 | Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006457 | Biological Process | protein folding |
| GO:0051082 | Molecular Function | unfolded protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 58.470 |
| SRR2545915 | Juvenile tuber | 55.210 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 71.740 |
| SRR5643514 | five period of Gastrodia elata | 53.190 | |
| SRR5643515 | five period of Gastrodia elata | 64.150 | |
| SRR5643524 | five period of Gastrodia elata | 70.480 | |
| SRR5643525 | five period of Gastrodia elata | 69.690 | |
| SRR5643528 | five period of Gastrodia elata | 102.050 | |
| SRR5643658 | five period of Gastrodia elata | 65.450 | |
| SRR5643659 | five period of Gastrodia elata | 90.700 | |
| SRR5643660 | five period of Gastrodia elata | 95.030 | |
| SRR5643661 | five period of Gastrodia elata | 112.550 | |
| SRR5643662 | five period of Gastrodia elata | 94.780 | |
| SRR5643663 | five period of Gastrodia elata | 84.130 | |
| SRR5643664 | five period of Gastrodia elata | 79.710 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 55.610 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 88.060 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 64.020 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 50.970 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 66.340 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 66.210 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 56.220 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 61.510 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 81.910 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 81.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 88.830 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 88.830 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 115.24 |
| Juven | Juvenile tuber | 83.17 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 149.53 | |
| Mother_Juven | Mother tuber of Juvenile | 126.30 |