Detail information of GWHGAAEX013664/evm.TU.scaffold_51.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|459289851|ref|YP_007513008.1|3.00E-133putative S-methyl-5-thioribose kinase [Bradyrhizobium oligotrophicum S58]
nrgi|743808703|ref|XP_010928400.1|0PREDICTED: methylthioribose kinase-like [Elaeis guineensis]
Swissprottr|Q9C6D2|MTK_ARATH0Methylthioribose kinase
trEMBLtr|V7BDR2|V7BDR2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW15058.1}
TAIRAT1G498200S-methyl-5-thioribose kinase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005751521105190876+
Transcript Sequence

Network for GWHGAAEX013664

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01636.22APH382738.00E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00899mtnK Metabolic pathways map01100
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName
GO:0009086Biological Processmethionine biosynthetic process
GO:0046522Molecular FunctionS-methyl-5-thioribose kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms244.220
SRR2545915Juvenile tuber271.930
SRP108465SRR5643513five period of Gastrodia elata93.960
SRR5643514five period of Gastrodia elata122.430
SRR5643515five period of Gastrodia elata91.790
SRR5643524five period of Gastrodia elata118.340
SRR5643525five period of Gastrodia elata81.490
SRR5643528five period of Gastrodia elata89.920
SRR5643658five period of Gastrodia elata91.800
SRR5643659five period of Gastrodia elata79.580
SRR5643660five period of Gastrodia elata88.520
SRR5643661five period of Gastrodia elata80.340
SRR5643662five period of Gastrodia elata71.530
SRR5643663five period of Gastrodia elata77.530
SRR5643664five period of Gastrodia elata77.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1150.860
SRR6049655Rhizomagastrodiae_C368-T10_good_1125.600
SRR6049656Rhizomagastrodiae_C368-T07_good_1121.060
SRR6049657Rhizomagastrodiae_C368-T07_good_1158.670
SRR6049658Rhizomagastrodiae_C368-T04_good_1144.360
SRR6049659Rhizomagastrodiae_C368-T04_good_1155.500
SRR6049660Rhizomagastrodiae_C368-T01_good_1126.540
SRR6049661Rhizomagastrodiae_C368-T04_good_1138.260
SRR6049662Rhizomagastrodiae_C368-T01_good_197.730
SRR6049663Rhizomagastrodiae_C368-T01_good_1101.790
SRR6049664Rhizomagastrodiae_C368-T10_good_1119.260
SRR6049665Rhizomagastrodiae_C368-T10_good_1119.260
SRP279888GastroGastrodia elata tuber 80.56
JuvenJuvenile tuber86.01
Mother_GastroMother tuber of Gastrodia elata 38.22
Mother_JuvenMother tuber of Juvenile 69.08