Detail information of GWHGAAEX013668/evm.TU.scaffold_52.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29221.00E-136Uncharacterized conserved protein
nrgi|695013314|ref|XP_009393437.1|0PREDICTED: magnesium transporter NIPA3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8GWX2|NIPA6_ARATH7.00E-150Probable magnesium transporter NIPA6
trEMBLtr|M0SGT9|M0SGT9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P22230_001}
TAIRAT1G344701.00E-136Protein of unknown function (DUF803)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000048102373113041-
Transcript Sequence

Network for GWHGAAEX013668

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05653.13Mg_trans_NIPA213214.70E-125
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015693Biological Processmagnesium ion transport
GO:0015095Molecular Functionmagnesium ion transmembrane transporter activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms72.230
SRR2545915Juvenile tuber67.220
SRP108465SRR5643513five period of Gastrodia elata66.450
SRR5643514five period of Gastrodia elata65.110
SRR5643515five period of Gastrodia elata58.960
SRR5643524five period of Gastrodia elata70.860
SRR5643525five period of Gastrodia elata53.780
SRR5643528five period of Gastrodia elata54.130
SRR5643658five period of Gastrodia elata52.610
SRR5643659five period of Gastrodia elata45.370
SRR5643660five period of Gastrodia elata45.630
SRR5643661five period of Gastrodia elata41.790
SRR5643662five period of Gastrodia elata36.360
SRR5643663five period of Gastrodia elata44.370
SRR5643664five period of Gastrodia elata42.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_165.140
SRR6049655Rhizomagastrodiae_C368-T10_good_149.390
SRR6049656Rhizomagastrodiae_C368-T07_good_168.750
SRR6049657Rhizomagastrodiae_C368-T07_good_156.630
SRR6049658Rhizomagastrodiae_C368-T04_good_163.980
SRR6049659Rhizomagastrodiae_C368-T04_good_156.390
SRR6049660Rhizomagastrodiae_C368-T01_good_158.260
SRR6049661Rhizomagastrodiae_C368-T04_good_160.520
SRR6049662Rhizomagastrodiae_C368-T01_good_188.550
SRR6049663Rhizomagastrodiae_C368-T01_good_170.730
SRR6049664Rhizomagastrodiae_C368-T10_good_180.090
SRR6049665Rhizomagastrodiae_C368-T10_good_180.090
SRP279888GastroGastrodia elata tuber 34.16
JuvenJuvenile tuber24.99
Mother_GastroMother tuber of Gastrodia elata 30.05
Mother_JuvenMother tuber of Juvenile 27.55