Detail information of GWHGAAEX013674/evm.TU.scaffold_52.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|312136740|ref|YP_004004077.1|7.00E-15RNA methylase [Methanothermus fervidus DSM 2088]
KOGKOG26710Putative RNA methylase
nrgi|672126193|ref|XP_008786539.1|0PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog isoform X2 [Phoenix dactylifera]
trEMBLtr|M0TYK2|M0TYK2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P08430_001}
TAIRAT3G264100methyltransferases;nucleic acid binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004813010111348303-
Transcript Sequence

Network for GWHGAAEX013674

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01170.17UPF00202003258.90E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0032259Biological Processmethylation
GO:0008168Molecular Functionmethyltransferase activity
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.420
SRR2545915Juvenile tuber13.250
SRP108465SRR5643513five period of Gastrodia elata10.810
SRR5643514five period of Gastrodia elata11.730
SRR5643515five period of Gastrodia elata10.390
SRR5643524five period of Gastrodia elata10.640
SRR5643525five period of Gastrodia elata5.720
SRR5643528five period of Gastrodia elata3.890
SRR5643658five period of Gastrodia elata5.000
SRR5643659five period of Gastrodia elata14.820
SRR5643660five period of Gastrodia elata15.870
SRR5643661five period of Gastrodia elata18.080
SRR5643662five period of Gastrodia elata14.590
SRR5643663five period of Gastrodia elata14.010
SRR5643664five period of Gastrodia elata13.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.890
SRR6049655Rhizomagastrodiae_C368-T10_good_17.470
SRR6049656Rhizomagastrodiae_C368-T07_good_110.950
SRR6049657Rhizomagastrodiae_C368-T07_good_18.970
SRR6049658Rhizomagastrodiae_C368-T04_good_18.080
SRR6049659Rhizomagastrodiae_C368-T04_good_18.230
SRR6049660Rhizomagastrodiae_C368-T01_good_19.820
SRR6049661Rhizomagastrodiae_C368-T04_good_18.430
SRR6049662Rhizomagastrodiae_C368-T01_good_113.820
SRR6049663Rhizomagastrodiae_C368-T01_good_110.700
SRR6049664Rhizomagastrodiae_C368-T10_good_111.650
SRR6049665Rhizomagastrodiae_C368-T10_good_111.650
SRP279888GastroGastrodia elata tuber 16.21
JuvenJuvenile tuber13.91
Mother_GastroMother tuber of Gastrodia elata 9.08
Mother_JuvenMother tuber of Juvenile 11.18