Detail information of GWHGAAEX013677/evm.TU.scaffold_52.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00486.00E-61Transcription factor, Myb superfamily
nrgi|460384106|ref|XP_004237755.1|1.63E-63PREDICTED: transcription factor MYB59-like [Solanum lycopersicum]
Swissprottr|Q9FDW1|MYB44_ARATH3.00E-36Transcription factor MYB44
trEMBLtr|K4BT45|K4BT45_SOLLC6.00E-64Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc04g064540.2.1}
TAIRAT1G179506.00E-61myb domain protein 52

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004815555241563783+
Transcript Sequence

Network for GWHGAAEX013677

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding13581.30E-17
PF00249.30Myb_DNA-binding651091.50E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.750
SRR2545915Juvenile tuber6.050
SRP108465SRR5643513five period of Gastrodia elata3.210
SRR5643514five period of Gastrodia elata1.100
SRR5643515five period of Gastrodia elata1.280
SRR5643524five period of Gastrodia elata1.440
SRR5643525five period of Gastrodia elata0.180
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.070
SRR5643659five period of Gastrodia elata3.070
SRR5643660five period of Gastrodia elata1.960
SRR5643661five period of Gastrodia elata2.570
SRR5643662five period of Gastrodia elata1.230
SRR5643663five period of Gastrodia elata1.560
SRR5643664five period of Gastrodia elata1.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.090
SRR6049655Rhizomagastrodiae_C368-T10_good_13.200
SRR6049656Rhizomagastrodiae_C368-T07_good_13.320
SRR6049657Rhizomagastrodiae_C368-T07_good_15.630
SRR6049658Rhizomagastrodiae_C368-T04_good_16.400
SRR6049659Rhizomagastrodiae_C368-T04_good_14.470
SRR6049660Rhizomagastrodiae_C368-T01_good_14.550
SRR6049661Rhizomagastrodiae_C368-T04_good_16.960
SRR6049662Rhizomagastrodiae_C368-T01_good_13.050
SRR6049663Rhizomagastrodiae_C368-T01_good_14.390
SRR6049664Rhizomagastrodiae_C368-T10_good_14.380
SRR6049665Rhizomagastrodiae_C368-T10_good_14.380
SRP279888GastroGastrodia elata tuber 4.56
JuvenJuvenile tuber5.89
Mother_GastroMother tuber of Gastrodia elata 2.72
Mother_JuvenMother tuber of Juvenile 7.12