Detail information of GWHGAAEX013684/evm.TU.scaffold_52.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21972.00E-167Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins
nrgi|672136231|ref|XP_008791806.1|0PREDICTED: small G protein signaling modulator 1-like isoform X1 [Phoenix dactylifera]
trEMBLtr|J3KVJ5|J3KVJ5_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB01G10010.1}
TAIRAT3G595702.00E-167Ypt/Rab-GAP domain of gyp1p superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004820119052076840-
Transcript Sequence

Network for GWHGAAEX013684

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00566.17RabGAP-TBC3535002.30E-31
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms111.310
SRR2545915Juvenile tuber51.550
SRP108465SRR5643513five period of Gastrodia elata29.620
SRR5643514five period of Gastrodia elata27.150
SRR5643515five period of Gastrodia elata25.700
SRR5643524five period of Gastrodia elata30.490
SRR5643525five period of Gastrodia elata36.980
SRR5643528five period of Gastrodia elata41.400
SRR5643658five period of Gastrodia elata43.450
SRR5643659five period of Gastrodia elata15.460
SRR5643660five period of Gastrodia elata18.470
SRR5643661five period of Gastrodia elata12.200
SRR5643662five period of Gastrodia elata12.270
SRR5643663five period of Gastrodia elata13.110
SRR5643664five period of Gastrodia elata15.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.730
SRR6049655Rhizomagastrodiae_C368-T10_good_122.210
SRR6049656Rhizomagastrodiae_C368-T07_good_131.350
SRR6049657Rhizomagastrodiae_C368-T07_good_151.490
SRR6049658Rhizomagastrodiae_C368-T04_good_154.390
SRR6049659Rhizomagastrodiae_C368-T04_good_171.750
SRR6049660Rhizomagastrodiae_C368-T01_good_140.320
SRR6049661Rhizomagastrodiae_C368-T04_good_147.290
SRR6049662Rhizomagastrodiae_C368-T01_good_122.000
SRR6049663Rhizomagastrodiae_C368-T01_good_128.600
SRR6049664Rhizomagastrodiae_C368-T10_good_124.260
SRR6049665Rhizomagastrodiae_C368-T10_good_124.260
SRP279888GastroGastrodia elata tuber 21.10
JuvenJuvenile tuber26.90
Mother_GastroMother tuber of Gastrodia elata 60.55
Mother_JuvenMother tuber of Juvenile 47.80