Gene detail

Detail information of GWHGAAEX013690/evm.TU.scaffold_52.35

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|695018267\|ref\|XP_009396089.1\|	PREDICTED: uncharacterized protein LOC103981183 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0SN00\|M0SN00_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P11350_001}
TAIR	AT5G55390	ENHANCED DOWNY MILDEW 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000048	2338527	2411719	-

Transcript Sequence
>GWHTAAEX013690 CGGAAGGGTTCTTCGTTGCCTTTTCTTTATATGCGATTCCGTCTAACACAGTGAACTCTGTGGGAAGAGGACTTTAAAATTGAGATTTTCATGTTTCATGAAGCTTATTGGTGGTCTTTCACAAAGGTTCTTAATGGCATCTTCAGATGATGAAGAGGTGGTAGTTCCACAGTCGGTTGCAAATTTCCATTTTGTGGACATAGATGGTGTACCCATATCATTTTCTAGATTACCAATCATCATGAATGATGATGAGACGCCAGAAGCTCCTATACACCAGGTATCTGTGCGTGGTACCACGGATGGTGGCCTTCAGTCTGTCTTCAAAGACATTGTTGCTTGGAAGCTGAGACTGGATGGAGATGACCCAGAGGTCTCTGTACTTACCAAAGACAACAAATGGTTAAAACTTGAGAGGCCGAAGAAGAGCTACGAGGAGTGTATTAAAGCAACATTGGTCATAATGCATTTGCTTCATTTTTCAAAAAAGAATCCCGAGGCATCTGTGAAGAACTTTTGGGAACATCTACGCCAAATTTCAAGCTCGTTTAATGAGAGACCAAGTATGGATGAGTTCAAACACCTAATGGAAATTATTAAGATGTTTCTAGAGAACGACACAATATTAGCCAAGTCACAGATTTTGTTGACATTTGTTAAGAACCCTGGAGAAGCTTTTGCTGAGGATTTTCAAAATAACTTAGGAGAAAGGCCTTTTTTTATTGACGATGAGTTGGAAAATGGTGGTATTGATGACGGTGAAGATTCAGAGGAAGAATCAGATTTATTTGATTCAGTGTGTTCTATATGTGATAATGGCGGTGAACTACTTTGCTGTGAAGGAAGGTGTTTGAGGTCTTTTCATGCAACTAAGAGAGCTGGATCCGACTCAGATTGCGCATCACTTGGCCTTACCAGGGTTCAAGTTGAGGCCATGCAAAACTTTTTGTGCAAGAATTGCCAGTTCAGAAAACATCAATGTTTTGCTTGTGGAAAGCTTGGTTCGTCTGATAAATCTGCAAATGCTGAGGTATTTTCCTGTGTTTCGGCCACATGCGGTCGTTTCTACCATCCAAAATGTGTTGCTGATTTGCTATTTCCTGAAAATAAAATCGAAGCAACTGGGCTGGGGAAAAGGATAGCAGATGGGGAATCGTTCACCTGCTCAGTGCATAGATGTTGTGTTTGCAAAAAAGTTGAAAACAAGGAGGTTGAGGAGTTACAGTTTGCAATATGCAGAAGGTGCCCCAAGGCATACCATAGAAAATGTTTACCAAGGAAAATTGCTTTTGAGGACGATGAAGATCAAAGTATCATCCAAAGGGCCTGGGAGGGCCTTCTCCCCAATCGTATTTTAATATACTGCTTAAAACATGAGATTGATGAGGAACTTGGAACTCCTTATAGAGATCACATCATATTTCCTGAATTACCTGAAAAGAAGAGGGAAATGGATATCCAGAAACTTAAACTAAAGAAAATTGTACTAGCTTCTGGCAAAATAACTGGGAATTTACAAACTTCAAATCCCACAAAGAGACTTGAGAAGTTTCCCACTGCTGATTCAGATGATTATGTGTTAACAGGTGGTAAAACATCTACCCAGAAAGTTCTAAACAGTCAGATTAAGTTGAATGTTCCTGCAAAAGATGTAAGACCTGCGGTCAAGAAAATTGAATCAAAGGACTTTCCAAAAGCAAGCTTGTCAAAAGTTGGTAAACCAAATTTTGATAGTGAAAAATCTTTATCTGGCAATGCAAAAGTAGCAAACTCTACAGCTGTTGTGCTTGGAAAGCTCATCAATACCGTTCCTAAGATTTTGCCTGAAATAAAAAAAGAGGTTCTTGCTTTGGTGGAACAAGAATCATCTTTGTTAACTCAAGATGACATCAGGAAGCGGCTTTCAAAACCTTCCACTTATGGAACATCTGTAGGGCAGATTGATAAGAGCATTACACTTGGGAAAATTGAGGGTGCAATTGAGGCTGTCCGTACTGCTCTAGAAAAGTTAGAAAAAGGTGGAAATGTGGAGGATGCCAAAGCTGTGTGTGAGCCCGAAATTCTCAAGCGGTTAATTAAGTGGCATGTTAAACTCAAAGTATATTTGGCACCTATTCTACATGGTGCACGATACTCATCTTTTGGTCGTCACTTTACCAAGCTTGACAAGCTGCAGGAGATTGTAGATAAGCTCCAGTGGTATGTACAAGATGATGACATGGTGGTGGATTTTTGTTGCGGTGCAAATGAATTTAGCATCCTGATGAAAGAGAAGCTTGATGCTGCTGGAAAGAAATGTTTTTTCAAAAACTATGACATTCTTCAGGCAAAGAATGACTTTAATTTTGAAATGAGAGATTGGATGACAGTTCGGTCCAATGAATTACCATCGGGATCAAAATTGATTATGGGCCTCAATCCTCCATTTGGATTAAATGCGCGGCTTGCCAACCAATTCATAGACAAAGCCCTTACTTTCAAGCCGAAGCTTCTTGTTCTCATAGTTCCACAGGAAACTCGGAGTTTAAATACGAAAAATCCGCCGTACGATTTAATCTGGGAGGATCGTGGTACCCTCTCAGGAAAGTCATTCTACTTGCCTGGTTCCATTGATGTGTATGAAAAGCAAATTGAGCAGTGGAATATGAAACCTCCACCTCTGTACTTGTGGAGTCGCCAGGACTGGACATCTAAGCACAAGGTTATAGCTGCAGTCCAAGGCCACAGGTCCAGGATGTCGTCTGCGCATGCTCCTGCAGATTCTCAGGTAAATGGCAATGGTGAAGATTCTCCTCCTCCCGTGGCTGCCAGTATTAAGAACTCCAGGGAGAGGGATTCTGCGGCTCATGAGGAGAGAGAAAGCGAGATGGCTGAGGCTCGAATGCAGGCCGAAAGAAGAGAAGAGGCAAAGATAGAAGCAGCTGATGACAAAAAGAGGCCTGAA

Network for GWHGAAEX013690

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12047.7	DNMT1-RFD	26	148	3.40E-06

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	132.410
SRP064423	SRR2545915	Juvenile tuber	103.650
SRP108465	SRR5643513	five period of Gastrodia elata	41.960
	SRR5643514	five period of Gastrodia elata	36.350
	SRR5643515	five period of Gastrodia elata	32.010
	SRR5643524	five period of Gastrodia elata	31.590
	SRR5643525	five period of Gastrodia elata	30.060
	SRR5643528	five period of Gastrodia elata	25.020
	SRR5643658	five period of Gastrodia elata	33.730
	SRR5643659	five period of Gastrodia elata	48.680
	SRR5643660	five period of Gastrodia elata	55.860
	SRR5643661	five period of Gastrodia elata	43.270
	SRR5643662	five period of Gastrodia elata	51.440
	SRR5643663	five period of Gastrodia elata	50.320
	SRR5643664	five period of Gastrodia elata	52.890
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	80.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	40.580
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	61.670
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	113.040
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	104.090
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	137.480
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	104.600
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	105.670
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	47.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	62.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.700
SRP279888	Gastro	Gastrodia elata tuber	70.60
	Juven	Juvenile tuber	105.29
	Mother_Gastro	Mother tuber of Gastrodia elata	29.79
	Mother_Juven	Mother tuber of Juvenile	70.07