Gene detail

Detail information of GWHGAAEX013709/evm.TU.scaffold_52.79

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743841894\|ref\|XP_010937653.1\|	PREDICTED: uncharacterized protein LOC105056958 [Elaeis guineensis]
trEMBL	tr\|M0RLP2\|M0RLP2_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P26680_001}
TAIR	AT2G37570	HSP20-like chaperones superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000048	4928024	4930668	-

Transcript Sequence
>GWHTAAEX013709 ACAAAAATTCGGATCATTTCACCGTAACCGTTCCGTAACGGCAAAGTCGGTCTCAACCAGTGGAGGGCGCTTGTGATTCGCTGTGTCCATAAAGCCCATCTAAGCCCACTTTCCTCTCTTCCTTCGCCTTATTGTCTCTCTCCTTGCTCACAAACACCTTGCCCTAAATGGCAAAAGGTAGCGTCTTTGGGTCTGGAAGCGGGGGATGTTTAACATCGGGAATGAGAATCCGTGCCGCCTCCGTTCTCGCTGAGGTAACCATCTCCAAGCGATCGCAGTCCTCATAGCGTTAGAACTTTGCTCTTGCTCCGCTCGTTTATGTGAAGATTCTTATTGTCATGTTCCCCTCTGATTTTTGCAACATGGTTTTCAGCCCTTGTCACAATTGGTTCTTATAGGTCACCTAAGGCATTTTCAACTGTTTAAACGGAATACTTAATAACAGATACACCATAGAAGTTTCTCTTTTTTTTAGTTTACATTGGTTTTCTGGATTTTTGGGGTTTCTTAAGCTAATTAAAGTTGGATATTGTATTTATGGAATGGATTTGTAAGGCCTTTTTGTGGGATGCTTTTCTTGATTGCGGTGGAAATCAGAATCCGCCAGACAGATAGGGCTCGTAAGAAGAGGAGAAGGGGGAGGAACTTCTTGAAAATTACTAAAAATTATTTTGCGGAAAGGTAGGAGAGTGAAAGCCATATGGGTGAGTCCCTACTCACCTCTCTATCCATGGAGAATCACTATCCATCAACACTTCTTTCCATGGATCCTATTGGAGGCCTATTACCTGCTGCAGTGCCCTCTTCGTATGATGATTTGGATCGAGATATGATGATTCAGCGCCAGCAACACATGCTCCCTGGTCCGCCTGACATAAACCTTCCCCTCTCAGCGGAGCATTCTTCTCCTCAGCAGAATTGGAACCCCGATCACTGTGAGATGCTTGATGTTGGTCTCGTGACTCAAATATACGAAACTGAGGCCACTGTCATCCTCCCTAAGTTTGGTTCACGAAAAGGTGGCAAGCGTGGAGATGGTATATGGGGTGCTTGGTTTTTCTTCAATTTCTACTTCAAGCCTGTTCTCTCTGAGAAATCTAAAGGAAAGATCATATGGGACGGATCTGGATTCTCTGGGTTCGACAAATCTGACCTCCGGCTCGATGTGTTCTTGGTTCAGCATGACATGGAGAACATGTACATGTGGTTGTTTAAGGAGAGATCAGAAAATGCTCTTGGTAAGATGCAGCTGAGGAGCTACATGAATGGCCACTGTCGTCACGGTGAGCCTCAATTCCCTTTCAGTTCTGATAAGGGCTTTGTTAGGTCACACCGGATGCAGCGAAAGCAATATAGAGGCTTATCTAACCCACAATGTGTTCATGGTATTGAGGTTGTAAGACTCCCAAATCTATCAGTTGTTTCTGAGGCTGATCATAAGAAGTGGATGGAACTGACAGGGAGGGAGCTTAATTTATCAATTCCACTAGAGGCTGGTGATTTTTCATCATGGAGAAATCTGCCCTGTGCTGAATTTGAGCCTGAGAGGCCGCCATCTTCTCTAAAGAGTATAGTGTCCCATCAACATCAAAGGAAGTTTCTTAATGGTTCAGGGTTGAACTTGTCAACACAGCCATCAGTTCAATCAGCTGCTAATGGGATAGACCTTCCTTGTGTTTTCAGCAAGCGCAGGAAGGATTTTTTCCCTCATGTAATGGAGGAAGACTTCTGTTCTCCTAACAATTCTTTTTCAGACAGGGTTCATGAAATTGAAATGAATGCTTTTGAGCCTCCATGGTTGAACGAGTTTAGTGGTGTGATGAGGCATGCTTTTGGACCGGTTACAGCTGCAAAAACTTTATATGAGGATGATGAAGGTTACCTTATTATGGTCAGCATGCCTTTATCTGATCAGCAGAGAGTAAAGGTGTCTTGGAGGAACACACTTACTCATGGAATAGTTAAGATATTCTGTGTTAGTACTGCCCGAATGCCTTATTTAAAGCGGCATGATAGGACATTCAAGCTGACTGATCTTTCTCCTGAGCACTGTCCTCATGGAGAATTCACAAGGGAGATATCTTTGCCTACACGTATACCTGAGGATGCTAAGTTGGAAGCTTATTATGATGAAACTGGGGCTGTTCTTGAGATTATGGTACCAAAGCATCGAGTTGGACCTGAGGAACATGAAGTTAGAGTGTGCTTGCGGCCTCCTCATCTTGTGGAGCCAATGAACTTCCATCGAGATTGTTTGGAGTAACAATTTATGTATGCCTTAAAGAAAAATTAAGTCTGTCATGCGTAAGAGCTTCATTACCATATACAAGTCTTTTTGCATTTTTTTGTCTTGCTTTCTGCCCTTTCCCATTTTCATTGATATTAAACTTGTACAATAATTTCTTTTCAAGTCTTTGACAGCCAGGCTTGATTTTGAACAATTTTACCTGTGAACTTATATATTTTGTTTTATCTTTTGGAGCCTTTTATATTTTTGTTAATTTAATACATAACTGAATTGAATTTACATGGTTTTGTTTAGGATCTTTAGCTGAAATTATTAAGAAAACGTTGTTCTGGAACTCCTCAAAAGAGTAGACTGACATTATATTGTTACATGATATTTATTCTGCTTACTTTTTTGT

Network for GWHGAAEX013709

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.060
SRP064423	SRR2545915	Juvenile tuber	25.160
SRP108465	SRR5643513	five period of Gastrodia elata	43.240
	SRR5643514	five period of Gastrodia elata	56.680
	SRR5643515	five period of Gastrodia elata	57.730
	SRR5643524	five period of Gastrodia elata	55.090
	SRR5643525	five period of Gastrodia elata	79.130
	SRR5643528	five period of Gastrodia elata	64.670
	SRR5643658	five period of Gastrodia elata	66.820
	SRR5643659	five period of Gastrodia elata	34.560
	SRR5643660	five period of Gastrodia elata	40.510
	SRR5643661	five period of Gastrodia elata	32.230
	SRR5643662	five period of Gastrodia elata	40.050
	SRR5643663	five period of Gastrodia elata	36.430
	SRR5643664	five period of Gastrodia elata	31.780
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	39.560
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	38.290
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	35.460
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	38.610
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	43.930
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	57.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	36.580
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	40.150
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	28.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	37.410
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	39.520
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	39.520
SRP279888	Gastro	Gastrodia elata tuber	53.99
	Juven	Juvenile tuber	43.35
	Mother_Gastro	Mother tuber of Gastrodia elata	97.08
	Mother_Juven	Mother tuber of Juvenile	89.40