Detail information of GWHGAAEX013712/evm.TU.scaffold_52.83
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|158338259|ref|YP_001519436.1| | 1.00E-52 | cytochrome P450 family protein [Acaryochloris marina MBIC11017] |
| KOG | KOG0157 | 1.00E-179 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|743789965|ref|XP_010923048.1| | 0 | PREDICTED: cytochrome P450 90A1 isoform X2 [Elaeis guineensis] |
| Swissprot | tr|Q42569|C90A1_ARATH | 3.00E-180 | Cytochrome P450 90A1 |
| trEMBL | tr|M5X6M8|M5X6M8_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ21589.1} |
| TAIR | AT5G05690 | 1.00E-179 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000048 | 5071288 | 5075378 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013712
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 32 | 463 | 2.70E-57 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP90 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09588 | CYP90A1, CPD | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Brassinosteroid biosynthesis | map00905 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 13.590 |
| SRR2545915 | Juvenile tuber | 13.210 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.950 |
| SRR5643514 | five period of Gastrodia elata | 16.890 | |
| SRR5643515 | five period of Gastrodia elata | 14.500 | |
| SRR5643524 | five period of Gastrodia elata | 15.880 | |
| SRR5643525 | five period of Gastrodia elata | 6.370 | |
| SRR5643528 | five period of Gastrodia elata | 3.340 | |
| SRR5643658 | five period of Gastrodia elata | 4.560 | |
| SRR5643659 | five period of Gastrodia elata | 14.680 | |
| SRR5643660 | five period of Gastrodia elata | 16.840 | |
| SRR5643661 | five period of Gastrodia elata | 16.440 | |
| SRR5643662 | five period of Gastrodia elata | 10.960 | |
| SRR5643663 | five period of Gastrodia elata | 11.210 | |
| SRR5643664 | five period of Gastrodia elata | 15.600 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 15.080 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.240 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 14.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.600 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 18.030 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.280 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.040 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 19.880 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.720 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.660 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.660 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 19.82 |
| Juven | Juvenile tuber | 11.72 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.55 | |
| Mother_Juven | Mother tuber of Juvenile | 7.42 |