Detail information of GWHGAAEX013715/evm.TU.scaffold_52.89
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0752 | 4.00E-142 | Mitochondrial solute carrier protein |
| nr | gi|695056000|ref|XP_009416204.1| | 3.48E-168 | PREDICTED: probable envelope ADP,ATP carrier protein, chloroplastic isoform X1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O65023|EAAC_ARATH | 1.00E-143 | Probable envelope ADP,ATP carrier protein, chloroplastic (Precursor) |
| trEMBL | tr|M0TX72|M0TX72_MUSAM | 2.00E-165 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P03630_001} |
| TAIR | AT3G51870 | 4.00E-142 | Mitochondrial substrate carrier family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000048 | 5370489 | 5400978 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013715
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00153.26 | Mito_carr | 74 | 165 | 9.60E-22 |
| PF00153.26 | Mito_carr | 168 | 255 | 2.40E-19 |
| PF00153.26 | Mito_carr | 263 | 344 | 2.70E-19 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.430 |
| SRR2545915 | Juvenile tuber | 11.750 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.280 |
| SRR5643514 | five period of Gastrodia elata | 11.820 | |
| SRR5643515 | five period of Gastrodia elata | 9.150 | |
| SRR5643524 | five period of Gastrodia elata | 10.480 | |
| SRR5643525 | five period of Gastrodia elata | 13.270 | |
| SRR5643528 | five period of Gastrodia elata | 15.020 | |
| SRR5643658 | five period of Gastrodia elata | 14.800 | |
| SRR5643659 | five period of Gastrodia elata | 14.570 | |
| SRR5643660 | five period of Gastrodia elata | 16.880 | |
| SRR5643661 | five period of Gastrodia elata | 13.740 | |
| SRR5643662 | five period of Gastrodia elata | 11.800 | |
| SRR5643663 | five period of Gastrodia elata | 12.430 | |
| SRR5643664 | five period of Gastrodia elata | 11.620 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 13.830 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.540 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.810 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.110 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.080 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.960 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.620 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.330 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.460 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.760 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.760 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.14 |
| Juven | Juvenile tuber | 10.62 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.99 | |
| Mother_Juven | Mother tuber of Juvenile | 8.12 |