Gene detail

Detail information of GWHGAAEX013730/evm.TU.scaffold_53.15

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|117925878\|ref\|YP_866495.1\|	3.00E-35	hypothetical protein Mmc1_2590 [Magnetococcus marinus MC-1]
KOG	KOG1022	0	Acetylglucosaminyltransferase EXT2/exostosin 2
nr	gi\|743797567\|ref\|XP_010925017.1\|	0	PREDICTED: glycosyltransferase family protein 64 protein C5-like [Elaeis guineensis]
Swissprot	tr\|Q84WB7\|GT645_ARATH	0	Glycosyltransferase family protein 64 protein C5 {ECO:0000303\|PubMed:24905498}
trEMBL	tr\|C5YUK2\|C5YUK2_SORBI	0	Putative uncharacterized protein Sb09g026940 {ECO:0000313\|EMBL:EES18583.1}
TAIR	AT5G04500	0	glycosyltransferase family protein 47

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000051	330208	364897	+

Transcript Sequence
>GWHTAAEX013730 TTATTTATTGTGAATTAATTTAATAAGTAGAAAAATCCTTCTGTGCTACAAGCTTCGTAGTTACTTCTATGCATTTTGTATTCAACGCGGCCTTCTTCTACCTCCTCAAGAAGTATTCAAGCCAAAGAATGGGGCGGGAGGTTCTTCTCCTTCCTATATCCTCCCGATCCTCGTTCTGAGTAAGTCCAAAGAAAGAGAATAAGCCTTTTCTTTCCTCAACTCTAGGACTTCATCTTGATGCTGGCGATGGGTGATAAAGGAGCCAAGTCGACAGAACCTTGTTATTTCCGCAGTTGGCAGCGTTCACGATGGCGAAGATGCAGTCTCCCTCTTGGTTATTTATCCCGTTCTTCCGGTCTCGTGTTCTTCTTTCTCGGATCCATCTTTATCTGCAGCATCGTGGCAATCTTTTTCTTTCGGGTTTGGGTTTCTTCCTTTCTGACGGTGAACTTGGTTTCGTCCGGCTGCCGTCCAGATGGGGAGGGATCGTGGTCGATTGGGATTTTTTACGGAAAGAGCCCCTTCTCGCTGGCTTCGATTGAATTGTCTAACAGGAGCAACGAGAAAAGCTCGGCTTGGCCAGTTGCGAATCCTGTGCTCACGTGTGCTTCTGTCTCCAATGCTGGGTATCCCAGCAATTTCGTTGCTGATCCTTTTCTTTTTGTTCAGGACAATACATTCTATCTGTTTTTTGAGACAAAAACTGTTGCCACAATGCAAGGTGATATTGGTGTGGCAAGTAGTTCTGATCAAGGTGCTTCATGGGAATTTCTAGGCATTGCTCTGGATGAAGCATGGCATCTTTCTTATCCATATGTATTCAACTACCATAATGATACCTATATGATACCAGAGGGCAGCAAAAATGGTGACCTTCGAATTTATCGAGCTACTAAATTTCCACTTGAGTGGACATTTGAGAAAGTTATTGTGAGTAAACCACTTGTAGATGCTTCGTTGGTTCAATATAATGGATATTATTGGCTCTTTACTTCAGATTTTAGCAGGTTGGGTACTGAGAAGAATGCAGAACTTGAAATATGGTACAGTGACTCACCACTTGGTCCATGGAAGGAACACATAAAAAACCCTATATACAGAGCTGACAAAAGCTTGGGCGCCAGAAGTGGAGGTCGTCTCTTTATTTATGAAGGTTCTCTCTACCGTCCTGGTCAGGACTGCAGTGGGACTTACGGTCGAAGACTCCAATTGTACAAGGTGAAAAAATTAACCAAGGAAGAGTACTTGGAAGTTCCAGTTTCACATGTCATTAATGAAACAAAGAAGGGACGTAACTCATGGAATGGTGTTAGACACCATCACCTAGACCCACAGCTGCTTCCTTCGGGAAGCTGGGTTGCTGTTATGGATGGTGATCGTGTTCCCTCTGGTGATTGGACAAGGAATTTACTTCTTGGTTGGACATTTTTGCTGCTGCTCTTTCTTCTAGTTATATTTATTGGACTGTTGGTTGGTGCTATGAATTGCATTCGTCCTCAAGGCAGTTTTCTTATTGTTAGCCGGAGAAATGAGCCGTTTTCTTATTTGGCAAATCCCCATTTCCATTCAAAGCTTCGGAGATACCTTGCAGCCATAACCCGATTCATTCAAACATGCAATGGCAGGACAAAGCTTAATGCATGTTATGGCAAGCTCATTATCAGCCTTCTTATTGTTATTGGAGTGATACTAGTCTGCATGGCTGTTCAATGTTTATATGGCGGTAATGGTGCGGAAGAGGGCTACATGTATAAGGGCCAGTATTCTCAATTTACAATGCTTACAATGACTTATGACGCTCGGCTCTGGAATCTAAAGCAGTATGTGAAACACTACTCCAGATGTGCATCTGTTAGGGAGATTGTGGTGGTGTGGAATAAGGGGAAGCCTCCTCTTGAGGATGAGTTCAATTCTGCTGTACCCGTCCGAATCCGTGTCGAGCAGCATAATTCTCTAAACAATCGTTTTAAGGAAGATCTTCTCATACAGACGAGGGCTGTACTTGAGCTGGATGATGATATATTGATGACCTGTAATGACATAGAGAAAGGATTTAGGGCCTGGAGAGAGCACCCTGAGAGAATTGTAGGTTTCTATCCCCGGCTTTTGAATGGAGCCCCTTTGAAGTATAGGGACGAGAAGTTTGCGAGGAAGAAAAATGGCTACAATGTTGTATTAACCGGTGCTGCTTTCATGGATACTGCGCTTGCTTTTAAAAGATATTGGAGCAAGCAGGCTGCAAGCGGGAGAGCTATAGTAGACAGATTATTTAATTGTGAAGATATCCTAATGAACTTTTTGTATGCCAATACAAGCTCTGTGAGGACCGTTGAGTATATTCACCCTTCATGGGCTGTTGACACATCCAAATTTTCTGCATCTGCTATCAGCAGAAATACGCAGCAGCATTATGATACCAGGACAGAATGCTTGCTTAGATTCTCCTCTATTTATGGCTCTCTTCCTAAAATGGCATGGAACTTTGGCAGTAGAGAGGATGGCTGGGATGCTTAATAAGTAGGCCTCCTGCCATAGATTACAATAAGCTCATTGCTTTTAGTAGATTGCAATATTTCAAAGAATGTATTTCAAGATGTTGGAGGTTTGGCTGGCATGAGCAATAGGGTTCTTTGTGAAAGTTCTAACTAGCATGGTAGTTTGTTTGAGCAGGTGGGTTTTTAACAGGGTAGAACTCTTTAAAATTTTTCCCTTTAAAATTATATAATTTCAATCCTTTACTGTGTGTGATGTAGCTTATGATCAAACAGTCACCTCCGAGGATAACATTGGACTAAAATTTAGTATATATTATGTAAGATAAAGTATGTGTTCTAGTAGTTTAACCCTGAGAAATTCCATTAGTTAATAATTTTTGCTTTTATTGTGATATGAAATAAAAGATGAGGGCATTTGCCTAATTGTATTAAATATGAAGAGGAAGTTCATTTGTTTTTTAATATTTACTAATCCCA

Network for GWHGAAEX013730

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF09258.9	Glyco_transf_64	512	745	3.50E-61

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT64

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	54.060
SRP064423	SRR2545915	Juvenile tuber	45.800
SRP108465	SRR5643513	five period of Gastrodia elata	34.960
	SRR5643514	five period of Gastrodia elata	24.610
	SRR5643515	five period of Gastrodia elata	37.970
	SRR5643524	five period of Gastrodia elata	32.730
	SRR5643525	five period of Gastrodia elata	36.900
	SRR5643528	five period of Gastrodia elata	43.730
	SRR5643658	five period of Gastrodia elata	28.850
	SRR5643659	five period of Gastrodia elata	35.470
	SRR5643660	five period of Gastrodia elata	34.990
	SRR5643661	five period of Gastrodia elata	39.710
	SRR5643662	five period of Gastrodia elata	31.230
	SRR5643663	five period of Gastrodia elata	31.310
	SRR5643664	five period of Gastrodia elata	23.330
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	37.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.060
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	34.860
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	40.570
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	44.530
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	58.190
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	40.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	45.370
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	34.330
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	37.450
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	32.280
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	32.280
SRP279888	Gastro	Gastrodia elata tuber	26.31
	Juven	Juvenile tuber	42.14
	Mother_Gastro	Mother tuber of Gastrodia elata	49.99
	Mother_Juven	Mother tuber of Juvenile	54.06