Detail information of GWHGAAEX013743/evm.TU.scaffold_53.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|193215265|ref|YP_001996464.1|3.00E-08Late embryogenesis abundant protein 2 [Chloroherpeton thalassium ATCC 35110]
nrgi|743796574|ref|XP_010924762.1|6.08E-71PREDICTED: late embryogenesis abundant protein Lea14-A-like [Elaeis guineensis]
Swissprottr|P46518|LEA14_GOSHI6.00E-63Late embryogenesis abundant protein Lea14-A
trEMBLtr|M0SX23|M0SX23_MUSAM3.00E-71Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P09440_001}
TAIRAT1G014705.00E-53Late embryogenesis abundant protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005113000771301130-
Transcript Sequence

Network for GWHGAAEX013743

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03168.12LEA_2451405.90E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009269Biological Processresponse to desiccation

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.950
SRR2545915Juvenile tuber29.750
SRP108465SRR5643513five period of Gastrodia elata7.580
SRR5643514five period of Gastrodia elata7.320
SRR5643515five period of Gastrodia elata6.750
SRR5643524five period of Gastrodia elata3.480
SRR5643525five period of Gastrodia elata107.060
SRR5643528five period of Gastrodia elata65.630
SRR5643658five period of Gastrodia elata164.780
SRR5643659five period of Gastrodia elata2.130
SRR5643660five period of Gastrodia elata3.520
SRR5643661five period of Gastrodia elata3.050
SRR5643662five period of Gastrodia elata3.830
SRR5643663five period of Gastrodia elata3.150
SRR5643664five period of Gastrodia elata10.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.340
SRR6049655Rhizomagastrodiae_C368-T10_good_16.170
SRR6049656Rhizomagastrodiae_C368-T07_good_15.130
SRR6049657Rhizomagastrodiae_C368-T07_good_17.440
SRR6049658Rhizomagastrodiae_C368-T04_good_14.190
SRR6049659Rhizomagastrodiae_C368-T04_good_14.510
SRR6049660Rhizomagastrodiae_C368-T01_good_16.230
SRR6049661Rhizomagastrodiae_C368-T04_good_15.880
SRR6049662Rhizomagastrodiae_C368-T01_good_15.340
SRR6049663Rhizomagastrodiae_C368-T01_good_14.400
SRR6049664Rhizomagastrodiae_C368-T10_good_14.320
SRR6049665Rhizomagastrodiae_C368-T10_good_14.320
SRP279888GastroGastrodia elata tuber 15.65
JuvenJuvenile tuber14.20
Mother_GastroMother tuber of Gastrodia elata 15.10
Mother_JuvenMother tuber of Juvenile 15.04