Detail information of GWHGAAEX013753/evm.TU.scaffold_53.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672159942|ref|XP_008799737.1|1.15E-52PREDICTED: transcription repressor OFP13-like [Phoenix dactylifera]
Swissprottr|Q9FMC8|OPF13_ARATH8.00E-27Transcription repressor OFP13
trEMBLtr|M0TWX2|M0TWX2_MUSAM2.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P02650_001}
TAIRAT5G048203.00E-26ovate family protein 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005121071592108055+
Transcript Sequence

Network for GWHGAAEX013753

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04844.12Ovate1291841.20E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.750
SRR2545915Juvenile tuber5.260
SRP108465SRR5643513five period of Gastrodia elata0.930
SRR5643514five period of Gastrodia elata0.780
SRR5643515five period of Gastrodia elata1.260
SRR5643524five period of Gastrodia elata0.680
SRR5643525five period of Gastrodia elata78.000
SRR5643528five period of Gastrodia elata67.750
SRR5643658five period of Gastrodia elata104.160
SRR5643659five period of Gastrodia elata2.960
SRR5643660five period of Gastrodia elata3.050
SRR5643661five period of Gastrodia elata4.230
SRR5643662five period of Gastrodia elata12.070
SRR5643663five period of Gastrodia elata11.590
SRR5643664five period of Gastrodia elata20.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.560
SRR6049655Rhizomagastrodiae_C368-T10_good_11.720
SRR6049656Rhizomagastrodiae_C368-T07_good_11.870
SRR6049657Rhizomagastrodiae_C368-T07_good_14.320
SRR6049658Rhizomagastrodiae_C368-T04_good_14.880
SRR6049659Rhizomagastrodiae_C368-T04_good_17.770
SRR6049660Rhizomagastrodiae_C368-T01_good_12.290
SRR6049661Rhizomagastrodiae_C368-T04_good_15.330
SRR6049662Rhizomagastrodiae_C368-T01_good_10.870
SRR6049663Rhizomagastrodiae_C368-T01_good_10.360
SRR6049664Rhizomagastrodiae_C368-T10_good_10.980
SRR6049665Rhizomagastrodiae_C368-T10_good_10.980
SRP279888GastroGastrodia elata tuber 18.83
JuvenJuvenile tuber1.02
Mother_GastroMother tuber of Gastrodia elata 2.45
Mother_JuvenMother tuber of Juvenile 3.58