Detail information of GWHGAAEX013757/evm.TU.scaffold_53.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|478177674|ref|YP_007698747.1|8.00E-116pyruvate dehydrogenase E1 component subunit alpha [Octadecabacter arcticus 238]
KOGKOG02250Pyruvate dehydrogenase E1, alpha subunit
nrgi|743811207|ref|XP_010929106.1|0PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial-like isoform X2 [Elaeis guineensis]
Swissprottr|P52901|ODPA1_ARATH0Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial (Precursor)
trEMBLtr|A0A061E6P1|A0A061E6P1_THECC0Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}
TAIRAT1G599000pyruvate dehydrogenase complex E1 alpha subunit

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005124120572435714-
Transcript Sequence

Network for GWHGAAEX013757

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00676.19E1_dh653605.50E-117
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00161PDHA, pdhA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
HIF-1 signaling pathwaymap04066
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006086Biological Processacetyl-CoA biosynthetic process from pyruvate
GO:0016624Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0004739Molecular Functionpyruvate dehydrogenase (acetyl-transferring) activity
GO:0043231Cellular Componentintracellular membrane-bounded organelle

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.770
SRR2545915Juvenile tuber49.910
SRP108465SRR5643513five period of Gastrodia elata104.700
SRR5643514five period of Gastrodia elata154.530
SRR5643515five period of Gastrodia elata115.770
SRR5643524five period of Gastrodia elata156.510
SRR5643525five period of Gastrodia elata89.060
SRR5643528five period of Gastrodia elata127.780
SRR5643658five period of Gastrodia elata71.970
SRR5643659five period of Gastrodia elata79.130
SRR5643660five period of Gastrodia elata80.990
SRR5643661five period of Gastrodia elata80.780
SRR5643662five period of Gastrodia elata69.220
SRR5643663five period of Gastrodia elata68.830
SRR5643664five period of Gastrodia elata67.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_199.560
SRR6049655Rhizomagastrodiae_C368-T10_good_186.960
SRR6049656Rhizomagastrodiae_C368-T07_good_1118.020
SRR6049657Rhizomagastrodiae_C368-T07_good_178.450
SRR6049658Rhizomagastrodiae_C368-T04_good_192.480
SRR6049659Rhizomagastrodiae_C368-T04_good_191.590
SRR6049660Rhizomagastrodiae_C368-T01_good_187.070
SRR6049661Rhizomagastrodiae_C368-T04_good_188.640
SRR6049662Rhizomagastrodiae_C368-T01_good_1144.910
SRR6049663Rhizomagastrodiae_C368-T01_good_1124.340
SRR6049664Rhizomagastrodiae_C368-T10_good_1179.520
SRR6049665Rhizomagastrodiae_C368-T10_good_1179.520
SRP279888GastroGastrodia elata tuber 94.82
JuvenJuvenile tuber136.69
Mother_GastroMother tuber of Gastrodia elata 91.34
Mother_JuvenMother tuber of Juvenile 144.23