Detail information of GWHGAAEX013761/evm.TU.scaffold_53.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG20850Serine/threonine protein phosphatase 2A, regulatory subunit
nrgi|743805003|ref|XP_010927329.1|0PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like [Elaeis guineensis]
Swissprottr|Q8RW96|2A5G_ARATH0Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform
trEMBLtr|A0A067K3K8|A0A067K3K8_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP30791.1}
TAIRAT4G15410_20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005130894393117784+
Transcript Sequence

Network for GWHGAAEX013761

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01603.19B56754871.10E-182
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11584PPP2R5 mRNA surveillance pathway map03015
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Meiosis - yeastmap04113
Oocyte meiosismap04114
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728

Gene Ontology

GO term OntologyName
GO:0007165Biological Processsignal transduction
GO:0019888Molecular Functionprotein phosphatase regulator activity
GO:0000159Cellular Componentprotein phosphatase type 2A complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.010
SRR2545915Juvenile tuber52.590
SRP108465SRR5643513five period of Gastrodia elata46.190
SRR5643514five period of Gastrodia elata43.940
SRR5643515five period of Gastrodia elata44.180
SRR5643524five period of Gastrodia elata41.390
SRR5643525five period of Gastrodia elata62.050
SRR5643528five period of Gastrodia elata67.610
SRR5643658five period of Gastrodia elata63.230
SRR5643659five period of Gastrodia elata46.060
SRR5643660five period of Gastrodia elata49.650
SRR5643661five period of Gastrodia elata51.960
SRR5643662five period of Gastrodia elata57.240
SRR5643663five period of Gastrodia elata48.290
SRR5643664five period of Gastrodia elata53.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.320
SRR6049655Rhizomagastrodiae_C368-T10_good_150.360
SRR6049656Rhizomagastrodiae_C368-T07_good_151.730
SRR6049657Rhizomagastrodiae_C368-T07_good_163.270
SRR6049658Rhizomagastrodiae_C368-T04_good_161.810
SRR6049659Rhizomagastrodiae_C368-T04_good_173.110
SRR6049660Rhizomagastrodiae_C368-T01_good_162.880
SRR6049661Rhizomagastrodiae_C368-T04_good_160.340
SRR6049662Rhizomagastrodiae_C368-T01_good_151.230
SRR6049663Rhizomagastrodiae_C368-T01_good_155.570
SRR6049664Rhizomagastrodiae_C368-T10_good_152.830
SRR6049665Rhizomagastrodiae_C368-T10_good_152.830
SRP279888GastroGastrodia elata tuber 41.67
JuvenJuvenile tuber43.05
Mother_GastroMother tuber of Gastrodia elata 52.06
Mother_JuvenMother tuber of Juvenile 57.50