Detail information of GWHGAAEX013762/evm.TU.scaffold_53.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694997603|ref|XP_009400267.1|7.83E-84PREDICTED: PRA1 family protein H [Musa acuminata subsp. malaccensis]
Swissprottr|Q8LFP1|PRA1H_ARATH3.00E-66PRA1 family protein H
trEMBLtr|M0S0A2|M0S0A2_MUSAM3.00E-84Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P15940_001}
TAIRAT4G275407.00E-51prenylated RAB acceptor 1.H

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005131573963163487-
Transcript Sequence

Network for GWHGAAEX013762

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03208.18PRA1992196.30E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.980
SRR2545915Juvenile tuber21.430
SRP108465SRR5643513five period of Gastrodia elata24.530
SRR5643514five period of Gastrodia elata30.070
SRR5643515five period of Gastrodia elata26.550
SRR5643524five period of Gastrodia elata28.540
SRR5643525five period of Gastrodia elata40.960
SRR5643528five period of Gastrodia elata36.060
SRR5643658five period of Gastrodia elata37.630
SRR5643659five period of Gastrodia elata34.840
SRR5643660five period of Gastrodia elata34.520
SRR5643661five period of Gastrodia elata37.670
SRR5643662five period of Gastrodia elata30.850
SRR5643663five period of Gastrodia elata29.760
SRR5643664five period of Gastrodia elata32.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.970
SRR6049655Rhizomagastrodiae_C368-T10_good_145.540
SRR6049656Rhizomagastrodiae_C368-T07_good_131.940
SRR6049657Rhizomagastrodiae_C368-T07_good_134.210
SRR6049658Rhizomagastrodiae_C368-T04_good_129.670
SRR6049659Rhizomagastrodiae_C368-T04_good_133.560
SRR6049660Rhizomagastrodiae_C368-T01_good_138.490
SRR6049661Rhizomagastrodiae_C368-T04_good_132.670
SRR6049662Rhizomagastrodiae_C368-T01_good_130.330
SRR6049663Rhizomagastrodiae_C368-T01_good_134.640
SRR6049664Rhizomagastrodiae_C368-T10_good_132.170
SRR6049665Rhizomagastrodiae_C368-T10_good_132.170
SRP279888GastroGastrodia elata tuber 39.58
JuvenJuvenile tuber31.07
Mother_GastroMother tuber of Gastrodia elata 31.35
Mother_JuvenMother tuber of Juvenile 37.90