Detail information of GWHGAAEX013764/evm.TU.scaffold_53.80
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|217970450|ref|YP_002355684.1| | 1.00E-61 | aldose 1-epimerase [Thauera sp. MZ1T] |
| KOG | KOG1594 | 2.00E-178 | Uncharacterized enzymes related to aldose 1-epimerase |
| nr | gi|225446010|ref|XP_002268176.1| | 0 | PREDICTED: putative glucose-6-phosphate 1-epimerase [Vitis vinifera] |
| Swissprot | tr|Q40784|AAPC_CENCI | 2.00E-177 | Putative glucose-6-phosphate 1-epimerase |
| trEMBL | tr|D7SQC7|D7SQC7_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI17858.3} |
| TAIR | AT5G57330 | 2.00E-178 | Galactose mutarotase-like superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000051 | 3351638 | 3397866 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013764
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01263.19 | Aldose_epim | 19 | 293 | 3.20E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0016853 | Molecular Function | isomerase activity |
| GO:0030246 | Molecular Function | carbohydrate binding |
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 98.370 |
| SRR2545915 | Juvenile tuber | 94.540 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 55.620 |
| SRR5643514 | five period of Gastrodia elata | 58.360 | |
| SRR5643515 | five period of Gastrodia elata | 56.850 | |
| SRR5643524 | five period of Gastrodia elata | 53.900 | |
| SRR5643525 | five period of Gastrodia elata | 94.310 | |
| SRR5643528 | five period of Gastrodia elata | 83.500 | |
| SRR5643658 | five period of Gastrodia elata | 75.460 | |
| SRR5643659 | five period of Gastrodia elata | 80.030 | |
| SRR5643660 | five period of Gastrodia elata | 89.520 | |
| SRR5643661 | five period of Gastrodia elata | 92.270 | |
| SRR5643662 | five period of Gastrodia elata | 109.330 | |
| SRR5643663 | five period of Gastrodia elata | 102.050 | |
| SRR5643664 | five period of Gastrodia elata | 109.350 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 86.500 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 69.550 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 71.600 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 81.620 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 88.110 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 85.970 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 69.710 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 72.340 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 63.840 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 72.200 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 67.100 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 67.100 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 134.05 |
| Juven | Juvenile tuber | 116.94 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 79.38 | |
| Mother_Juven | Mother tuber of Juvenile | 92.07 |