Gene detail

Detail information of GWHGAAEX013778/evm.TU.scaffold_53.99

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1471	Phosphatidylinositol transfer protein SEC14 and related proteins
nr	gi\|672144135\|ref\|XP_008795962.1\|	PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q94A34\|SFH12_ARATH	Phosphatidylinositol/phosphatidylcholine transfer protein SFH12
trEMBL	tr\|M0T138\|M0T138_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P23630_001}
TAIR	AT4G36490	SEC14-like 12

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000051	4390251	4413996	+

Transcript Sequence
>GWHTAAEX013778 CGGAGGGGGCACATGCTATATAATAGAAAGGACTTTACACCGAGGAGAAATGGAAGGAGCGGCTTGCACTTCGGCAAGGCAGCGCTCAACAAGCGAAGCACTCATCAAAATTTCTACGAAAATAGCTCTTGCGCCCTTTGCCCAATCTCCCCTTTCCGTCTCTATCCCCCTGCATGCTCACGAAGGGTAAATATAAATATACAATATGAGTGAAGTACATTCTGGGAGTTTGGACCGCTTTGGCAAGCCTGGATTTGATGTCATTGAGGAGAATAAAGAAGAGCCCAAAATGGGGTCTTTTAAGAAGGGGCTAAATAACTCGAGTAAATTCCGGCATTTGATGAACAAAAGAGGCAGAAGAAGCAGCCGGGTTTTGTCCGTCTCCATTGAGGATGATCGCGATGCTGAGGAGATGCATTTTGTTGATGCTTTCAGACAGACCCTCATTCTGGAGGAGCTGCTTCCCTCAAAACATGATGACTATCATATGATGCTCAGATTTCTAAAGGCCCGAAAGTTCGATATTGAGAAGACAAAGCAAATGTGGGCCGACATGCTTCAATGGAGGAAGGACTTTGGTGCTGACACAATCCTTGAGGAATTTGAGTATGAGGAGATTGATAAAGTGTTGGAGAACTACCCACAATGCCATCATGGTGTTGACAAAGAAGGCAGACCTGTTTATATTGAAAAACTCGGACAGGTTGATGCTAACAAAATGATGCAATATACAGACGCTGATCGTTACATCAACTACCATGTCCGAGAATTTGAGAGGATATTTGCTGTCAAGTTCCCAGCTTGCTCTATTGCTGCAAAGCATCACATTGATCAGAGCACCACTATTCTTGATGTGCAAGGAGTGGGTTGCAAGCACTTGAGCAAGACAGCAATAGATCTATTTAGACGCATTCACAAGATTGATGATAATAATTACCCAGAGACGTTGAACTGCATGTTCATCATCAATGCTGGCCCTGGATTTAGGATCCTATGGAACTCTATAAAACCAATCCTGGATCCAAGAACTACAGCAAAGATCCACGTTCTTGGCAACAAGTACCAGAGCAAGCTGCTTGAAGTAATTGATGCTAGTGAATTGCCAGAATTCCTTGGCGGCACATGTAAATGCGCCAACGAGGGAGGCTGCCTACGTTCGGATAAAGGCCCATGGAAAGATCCCGAAATTTTGAAGCTTATTCATAGTAGTGAGGCCAAGTCACTAAAGCTAAACGCTGCTGCAAGCACTGATGAGAAGTTGATTTCTGAGGATGAGATCTTCTACAACAAGAGACATGATTCACTTTCTAACGGGATTGCAATCCCTGTTGAAGATGTCAAGTCCCCTAATTTTTCGAGGAGGATGATTGAGCACCCGCATCTGTCACCTGTGCACGAAGAAATGAATAGCTATGATCAAATTATGAAGAAGTGCCCTTCCTTTAATGTTCCAATGGTTGACAAGACTGTTGATGCCAACTGGAGCAAGGAATTGTCTAATTACAAGATCACCACTACTAAAGGTGCGCATGACATTGCGAATAACTGTAAGATTGGCAAATCAAACGGAAGTATTTTAACAGGAGTCATGACCTTTGTCATGGGAATGGTAGCCATGACCAAGGTGTCCAAGAACTTAAGGAGGAAGATTGTGGATGAGCAGGATGTCTGCTACTCGAAAGATTTGGAAAAGAGCCAGAGTGTGGCAGCCAAGCCCTCTTCTATCTCCATGGCTGAGTACTCTGCGGTTGTGAAGCGCCTTGGAGAGCTCGAGGAAAAGGTGCGCGTTCTTAACAAGAAGCCTGAATCCTTACCAGAGAAGGAAGAAATAATCAACGCGGCTGTGAATCGCGTGACCATTTTGGAGGCCGAGCTTGCCGCTACAAGGAAGGTTCTGGAAGGCACGCTTTCTAAGCAAGAGGAGCTTCTTGCTTACATAGAAAAAAAGAAAAAGAAGAAGAATAGATCTTTTTTTGCTGGTAAATGGTGGTCAAAAGAAGAAGGCTCTTCAGCTGCAAGCAACAAAAAATAAAAGCTGCTTGCTGCAAGAAAATGGGGTGCAGTTCAGTCTTTCCAAAATTTATATGATTTCATATATGAAACCTTGTGATGATTCATTTATTCTTTGGAAGATCTATAAATTGTTCTAAATAAATACTTTTTTGATTGGGGCATTATTTAACTAATGCTGTTTACTTTGAAAATTTTATTTGTGCTACGGTTTAACATATTCTGTGGACATTTATTACATATTTTAATATAGACTCGATCTTCATTGGAGGTTATTAAGAAGAATGAATGTGGGATTCAGTGGGGTGCGAAAGCTGAAGGTGTATAGGCATCAATGCTGTTTTCAAAGGGTATTCTGCGTTCTCTGAACCTAAAAGGTTGTGTATGCAGAATATATGAAGAATGTAATGGCTCCGCACTAGTTGAATTTGTGAGGATTATTCAGTGAGTGTGTAACCATATGTAATCGCCCATTTTTTAGCTTTTGTTCGAATTCTGATCAAGGTCACAATCTCATGATAATGCCAATGCTGGCTGGTTGGCATCTTTTAGGTACCTTGCAAAATTAACACTTC

Network for GWHGAAEX013778

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03765.14	CRAL_TRIO_N	89	116	1.90E-06
PF00650.19	CRAL_TRIO	140	306	4.60E-33

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.080
SRP064423	SRR2545915	Juvenile tuber	13.690
SRP108465	SRR5643513	five period of Gastrodia elata	10.310
	SRR5643514	five period of Gastrodia elata	11.090
	SRR5643515	five period of Gastrodia elata	10.000
	SRR5643524	five period of Gastrodia elata	10.280
	SRR5643525	five period of Gastrodia elata	9.260
	SRR5643528	five period of Gastrodia elata	11.080
	SRR5643658	five period of Gastrodia elata	10.340
	SRR5643659	five period of Gastrodia elata	11.220
	SRR5643660	five period of Gastrodia elata	11.450
	SRR5643661	five period of Gastrodia elata	11.380
	SRR5643662	five period of Gastrodia elata	10.600
	SRR5643663	five period of Gastrodia elata	11.080
	SRR5643664	five period of Gastrodia elata	9.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.620
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.670
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.330
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.710
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.780
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.830
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.760
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.760
SRP279888	Gastro	Gastrodia elata tuber	12.20
	Juven	Juvenile tuber	10.18
	Mother_Gastro	Mother tuber of Gastrodia elata	11.55
	Mother_Juven	Mother tuber of Juvenile	11.98