Detail information of GWHGAAEX013779/CADD01089.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83312125|ref|YP_422389.1|8.00E-40hypothetical protein amb3026 [Magnetospirillum magneticum AMB-1]
KOGKOG11207.00E-67Fe-S cluster biosynthesis protein ISA1 (contains a HesB-like domain)
nrgi|255575681|ref|XP_002528740.1|9.76E-74iron-sulfur cluster assembly protein, putative [Ricinus communis]
Swissprottr|Q8LBM4|ISAM1_ARATH2.00E-67Iron-sulfur assembly protein IscA-like 1, mitochondrial (Precursor)
trEMBLtr|B9SRX1|B9SRX1_RICCO4.00E-74Iron-sulfur cluster assembly protein, putative {ECO:0000313|EMBL:EEF33652.1}
TAIRAT2G167107.00E-67Iron-sulphur cluster biosynthesis family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005144596944478908+
Transcript Sequence

Network for GWHGAAEX013779

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01521.19Fe-S_biosyn441433.00E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0097428Biological Processprotein maturation by iron-sulfur cluster transfer
GO:0051536Molecular Functioniron-sulfur cluster binding
GO:0005198Molecular Functionstructural molecule activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.200
SRR2545915Juvenile tuber13.650
SRP108465SRR5643513five period of Gastrodia elata22.730
SRR5643514five period of Gastrodia elata27.700
SRR5643515five period of Gastrodia elata21.850
SRR5643524five period of Gastrodia elata27.750
SRR5643525five period of Gastrodia elata30.080
SRR5643528five period of Gastrodia elata28.810
SRR5643658five period of Gastrodia elata25.200
SRR5643659five period of Gastrodia elata19.790
SRR5643660five period of Gastrodia elata16.250
SRR5643661five period of Gastrodia elata23.670
SRR5643662five period of Gastrodia elata22.560
SRR5643663five period of Gastrodia elata18.390
SRR5643664five period of Gastrodia elata16.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.080
SRR6049655Rhizomagastrodiae_C368-T10_good_113.300
SRR6049656Rhizomagastrodiae_C368-T07_good_117.510
SRR6049657Rhizomagastrodiae_C368-T07_good_113.530
SRR6049658Rhizomagastrodiae_C368-T04_good_117.240
SRR6049659Rhizomagastrodiae_C368-T04_good_110.690
SRR6049660Rhizomagastrodiae_C368-T01_good_112.680
SRR6049661Rhizomagastrodiae_C368-T04_good_113.740
SRR6049662Rhizomagastrodiae_C368-T01_good_122.230
SRR6049663Rhizomagastrodiae_C368-T01_good_120.740
SRR6049664Rhizomagastrodiae_C368-T10_good_125.400
SRR6049665Rhizomagastrodiae_C368-T10_good_125.400
SRP279888GastroGastrodia elata tuber 23.65
JuvenJuvenile tuber17.64
Mother_GastroMother tuber of Gastrodia elata 43.56
Mother_JuvenMother tuber of Juvenile 31.71