Detail information of GWHGAAEX013781/evm.TU.scaffold_53.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|195952417|ref|YP_002120707.1|1.00E-12hypothetical protein HY04AAS1_0037 [Hydrogenobaculum sp. Y04AAS1]
nrgi|672181716|ref|XP_008811084.1|2.43E-153PREDICTED: bifunctional nuclease 2-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q93VH2|BBD2_ARATH2.00E-137Bifunctional nuclease 2
trEMBLtr|E0CQH3|E0CQH3_VITVI6.00E-150Putative uncharacterized protein {ECO:0000313|EMBL:CBI19742.3}
TAIRAT1G196608.00E-137Wound-responsive family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005146363284653875-
Transcript Sequence

Network for GWHGAAEX013781

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02577.13DNase-RNase1352522.00E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004518Molecular Functionnuclease activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms129.530
SRR2545915Juvenile tuber69.690
SRP108465SRR5643513five period of Gastrodia elata79.290
SRR5643514five period of Gastrodia elata91.570
SRR5643515five period of Gastrodia elata85.030
SRR5643524five period of Gastrodia elata90.660
SRR5643525five period of Gastrodia elata171.220
SRR5643528five period of Gastrodia elata178.760
SRR5643658five period of Gastrodia elata247.790
SRR5643659five period of Gastrodia elata50.170
SRR5643660five period of Gastrodia elata61.360
SRR5643661five period of Gastrodia elata54.920
SRR5643662five period of Gastrodia elata66.590
SRR5643663five period of Gastrodia elata57.760
SRR5643664five period of Gastrodia elata82.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.320
SRR6049655Rhizomagastrodiae_C368-T10_good_149.050
SRR6049656Rhizomagastrodiae_C368-T07_good_158.250
SRR6049657Rhizomagastrodiae_C368-T07_good_1117.750
SRR6049658Rhizomagastrodiae_C368-T04_good_1130.990
SRR6049659Rhizomagastrodiae_C368-T04_good_1179.830
SRR6049660Rhizomagastrodiae_C368-T01_good_185.720
SRR6049661Rhizomagastrodiae_C368-T04_good_1120.810
SRR6049662Rhizomagastrodiae_C368-T01_good_134.610
SRR6049663Rhizomagastrodiae_C368-T01_good_149.090
SRR6049664Rhizomagastrodiae_C368-T10_good_143.390
SRR6049665Rhizomagastrodiae_C368-T10_good_143.390
SRP279888GastroGastrodia elata tuber 84.85
JuvenJuvenile tuber62.87
Mother_GastroMother tuber of Gastrodia elata 248.02
Mother_JuvenMother tuber of Juvenile 142.62