Detail information of GWHGAAEX013786/evm.TU.scaffold_53.108


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32055.00E-89Rho GDP-dissociation inhibitor
nrgi|672162298|ref|XP_008800978.1|3.23E-119PREDICTED: rho GDP-dissociation inhibitor 1-like [Phoenix dactylifera]
Swissprottr|Q9SFC6|GDIR_ARATH2.00E-89Rho GDP-dissociation inhibitor 1
trEMBLtr|M0RMB4|M0RMB4_MUSAM3.00E-112Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P28900_001}
TAIRAT3G078805.00E-89Immunoglobulin E-set superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005150639185096604-
Transcript Sequence

Network for GWHGAAEX013786

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02115.16Rho_GDI602452.40E-77
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12462ARHGDI, RHOGDI Vasopressin-regulated water reabsorption map04962
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0005094Molecular FunctionRho GDP-dissociation inhibitor activity
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.280
SRR2545915Juvenile tuber13.380
SRP108465SRR5643513five period of Gastrodia elata16.490
SRR5643514five period of Gastrodia elata20.010
SRR5643515five period of Gastrodia elata20.900
SRR5643524five period of Gastrodia elata18.550
SRR5643525five period of Gastrodia elata27.110
SRR5643528five period of Gastrodia elata29.170
SRR5643658five period of Gastrodia elata23.080
SRR5643659five period of Gastrodia elata9.150
SRR5643660five period of Gastrodia elata9.460
SRR5643661five period of Gastrodia elata12.020
SRR5643662five period of Gastrodia elata7.710
SRR5643663five period of Gastrodia elata6.340
SRR5643664five period of Gastrodia elata7.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.440
SRR6049655Rhizomagastrodiae_C368-T10_good_120.090
SRR6049656Rhizomagastrodiae_C368-T07_good_112.130
SRR6049657Rhizomagastrodiae_C368-T07_good_113.940
SRR6049658Rhizomagastrodiae_C368-T04_good_113.650
SRR6049659Rhizomagastrodiae_C368-T04_good_111.460
SRR6049660Rhizomagastrodiae_C368-T01_good_114.450
SRR6049661Rhizomagastrodiae_C368-T04_good_117.570
SRR6049662Rhizomagastrodiae_C368-T01_good_116.630
SRR6049663Rhizomagastrodiae_C368-T01_good_115.150
SRR6049664Rhizomagastrodiae_C368-T10_good_120.590
SRR6049665Rhizomagastrodiae_C368-T10_good_120.590
SRP279888GastroGastrodia elata tuber 7.33
JuvenJuvenile tuber19.98
Mother_GastroMother tuber of Gastrodia elata 25.94
Mother_JuvenMother tuber of Juvenile 29.16