Gene detail

Detail information of GWHGAAEX013787/evm.TU.scaffold_53.110

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|397779706\|ref\|YP_006544179.1\|	2.00E-26	pyruvate, water dikinase [Methanoculleus bourgensis MS2]
nr	gi\|695056735\|ref\|XP_009416602.1\|	0	PREDICTED: phosphoglucan, water dikinase, chloroplastic [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q2QTC2\|PWD_ORYSJ	0	Phosphoglucan, water dikinase, chloroplastic (Precursor)
trEMBL	tr\|A0A067KC01\|A0A067KC01_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP32558.1}
TAIR	AT5G26570	0	catalytics;carbohydrate kinases;phosphoglucan, water dikinases

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000051	5201329	5296661	-

Transcript Sequence
>GWHTAAEX013787 TTTCTTTTTTATTATTTATTCACCACGTTCGAGCAAGGCTTCTTCACTTATTTATTCAAGTCGACAAAACTTCCAGTAGCCCTCATAGTGATCACAGTTTCATTCACAATCTCAAATATACATAGCAGTTCCATCTCGAATTTCGATTCTTGAGATCCATGACTTCTTCACTCGCCCACCTTAGTCTTTTCTTCTCTCAACCCCTTCTCTGCGTATCTCCCCATCATCTTTCCCCGCAGGCCATAAATGGCCGCCCCCGCTCCCGAATCCCCCCTCTCCGCTTCCGCTGCCACAGCAGCAGCAGCAGCAGCGCCACTACCGCAATAGAAAGGGCAGATGAGAAGGAGCCTAAAGAACCAATGAAGAGAGGGAAGGTCCGCTTGTGCCTTCGCTTAGACCATCAGGTTGAGTTTGGGGAGCATGTAGCCATTCTCGGATCGAACAAAGAGCTTGGGATGTGGACGAAGCAGATACTGATGCAGTGGACGGAGGCCGGATGGGTATGCGATCTAGATCTTCGAGGTGGCGAAGCTATGGAGTTTAAATTCGTGATAATTAAAGAGAGAGAGACGGGTATTATATGGGAGGAAGGGGATAATCGAACTTTTACTGTTCCTACTAGTGGGGTTTATGATTTAGTATGCGAATGGAATGAGACGAGAGAAGTACCGAATCTTCTGGAGAGGGAGAGGGAGAGAGAGCAGGTGGAAGGTGAGGGTAATGGAGATAATCCCAGTGGGGAAGTTGAAGGGATTATTGCACGAGTTAGTTCTTTTGTGGAGCAGTGGAAGGGGAGCGATGTTTCATTTATGCAGTCTAACTCACACAGGGATAGGGAGACAGAGAGGAGATGGGACACCAGGGGGATCGATGGCCTTGCTTTAGAGCTGGTGGAGGGAGACAAAACCGCTAGGAATTGGTGGCGCAAGCTTGAGGTTGTTCATAGCTTGTTGGCACAGAATCTTGAACCTGTGGATCGTCTAGAAGCACTCCTTTATTCTTCTGTTTACTTGAAGTGGATAAACACAGGTCAGATCCCCTGCTTTGAAGATGGTGGTCATCATCGACCAAGCAGACATGCTGAGATTTCAAAACTTATTTTTTGTGACCTTGAAAGAATGATCCATGAAAAAAATGCATCTTCAAAGGATATACTTGTTATCAGGAAAATTCACCCATGCCTGCCTTCTTTTAAGTCAGAGTTTACAGCTTCTGTTCCTCTTACACGAATCCGAGATATTGCGCACCGCAATGATATTCCTCATGATCTGAAGCAAGAGATAAAGCATACCATACAGAATAAACTTCACCGTAATGCTGGACCAGAAGATTTGGTGGCTACAGAGGCCATGCTTGCCAAAATTACAAAAACCCCAGGGCAATATAGTCAGTCTTTTATAGATCAGTTCAAGGTTTTTTACAGGGAGCTTAAAGATTTCTTTAATGCTGGGAGTCTGACTGAACTTCTGGATTCGATTAAAGAATCTTTGGATGATCAAAAATCAGCTCTTAACCTTTTTCTGAAATGCAAAACGAAATTAGAAGACTTTTCCAAAGAACAACCTAGAGGAGATTGCATTGCTAGTCTACTGATCAATGCACTGGAGTCCTTGACAAACTTGAGATCACTGATTGTTAAAGCTCTTAAAAGTGGCCTTAGAAATGATGCTCCAGATACGGCTATTGCTATGCGTCAAAAGTGGCGTCTATGTGAGATTGGCCTTGAAAAGTATTCTTTTGTTCTTTTAAGCAGATTTATTAATGAGCTTGAAGCTATGGGAGGATCAACATGGTTGGCGCATAATGTGACTTTAAGAAGCATTGGTCCTTGGAACGATCCACTTTGTGCTCTTATTGTAGGTATTCGTCAAGTTGGTCTTTCAGATTGGAGGCAAGAAGAATGTAATGCTATAGAAAATGAAATTCTTGCATGGAAACTAGGACTTTCTGAAAGAGAAGGCAACGAGGATGGAAAGCGTGTCTGGGCTTTGAGGCTTAAGGCCACCCTTGATAGAGCAAGAAGGATGACTGAGGATTACTCTGAAGTATTGCTTCAGATATTTCCTGATAAAGTCGAGAGGTTGGGACAAGCTCTTGGAATTCCATCAAACAGTGTGAGAACATATACTGAAGCTGAGATACGTTCAAGCGTTACATTCCAGATTTCAAAACTTTGCACATTACTTCTAAAGGCATTACAGATTGCACTGGGTACTCTAGGCTGGGATGTTCTTGTCCCAGGTGTGGCTTATGGAACCCTTTTACAGATAGAGAGCATCAATCCTGGCTCATTGCCTTCATCTACTGAAGGCCCTGTTATTCTTGCAGTGAAAAGGGCTACTGGTGATGAGGAGGTTAAGGCTGCTGGCAGTAATATAGTAGGGGTTATACTATTGCAGGAATTACCTCATTTATCACACCTTGGTGTTAGAGCACGGCAGGAAAAGGTGGTTTTTGTGACATGTGAAAATGAGGAAGAAATTGCTAAATTTCAAGCACTCGAAGGAAAACACGTGAGGTTGGAAGCATCAACTACTAGAGTTAACTTGTCTGCATTTTCCCTAAAAGATAGTGAGGAGAAACTGTTTATAGGTCCAGCAGGAAACGGAACATCTATGCAAAAGTACTCAGCATTATCTTTTTCTCCAACCGATGTCAGCACCCCGCTCTTAACTAAGGTTTCAGCCAGTGTACTGGAGCTTTCAAAAACAGATATTGATTCTTGTGGAGCAAAGGCAACATCATGCGGAAGTCTTGCTGCTCTAGCATCAATTTCTGAGAAAGTTCTTACCGATCAGGGCATTCCGGCTACATTTAAAGTTCCGGCAGGAGCTGTACTACCTTTTGGATCAATGGAAGCAATGCTCAAGCAAACTGGATCACTAGATAGCTTTCTTTCTCTCTTAAAAAGGATTGAAACAGCCAACTTAGATGGTGGTGAACTCGATCGGTTGTGCTCTGACCTTCAGGCTTTGATTTTGGCTCACGTTCCATCTCAAGAAACTATCAAAGCCATTAACAGAATAATTCCATCCAATGCCCGACTTATAGTGAGATCAAGTGCTAATGTGGAAGATCTTGCAGGAATGTCTGCTGCTGGACTGTATGAATCCATCCCAAATGTCAGTTTATCAAGCCCAACAATCTTTGGATCTGCCGTAAGCCGTGTATGGGCTTCATTGTATACGAGGCGAGCCATTCTGAGTCGTAGAGCTGCTGGTGTTCCTCAGTGGAAGGCTCAGATGGCTGTTTTATTGCAGCAGATGCCATCGCCTTCTCTCTCTTTCGTCCTGCACACTGTTAGCCCAGCTGAGCATGACCCCAAACTTGTTATGGCTGAGATTGCATCAGGCCTAGGGGAAACTCTTGCATCAGGAACTCGTGGTGTTCCATGGAGGCTATCCTGCAACAAGTTTGATGGCGAAGTTTGTACACTGGCTTTTGCCAACTTCAGTGAAGAGTTGTTAGTGCTTGATTCCAGACCTGCTGATGGAGAAGTTTCCCGTTTAACCGTTGATTACAGTAAGAAGCCTATAACACTTGATCCTATCTACAGGAAACAGTTGGGGCAACGCCTTTGTGCCATTGGATCTTTGCTTGAGCAGAAGTATGGGTGCCCACAGGACGTTGAAGGCTGTGTTGTAGGGAATGACATTTTCATAGTTCAGACAAGACCTCAACCGTGATAAACGATCTGCTTTTTTTATTTTGGCAAGAAAACTATGGAATTTTTTTTTTTGGATTATGTTGTATATTTCTTTTCTACTTCAAGAATAAACAGATCAATTCGAACTAAATATTTGATTGAAATGGTTGATCCATTGATTGATCTCAAGTGGCTTGAATTTGATTTGATTTGATCTCAAGCAAGTTTGCATTGTTTTGAGACTGATTTTCATCTTGGTGTATTGAACTAAAGAGCAAAACAGATTGATTACACATTTTGAATTTTGATCAAATTTTATTTTTGTTTGTTC

Network for GWHGAAEX013787

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00686.18	CBM_20	77	156	6.90E-14
PF01326.18	PPDK_N	881	1174	1.80E-30

Protein Sequence

>GWHPAAEX013787
MTSSLAHLSLFFSQPLLCVSPHHLSPQAINGRPRSRIPPLRFRCHSSSSSSATTAIERADEKEPKEPMKRGKVRLCLRLDHQVEFGEHVAILGSNKELGMWTKQILMQWTEAGWVCDLDLRGGEAMEFKFVIIKERETGIIWEEGDNRTFTVPTSGVYDLVCEWNETREVPNLLEREREREQVEGEGNGDNPSGEVEGIIARVSSFVEQWKGSDVSFMQSNSHRDRETERRWDTRGIDGLALELVEGDKTARNWWRKLEVVHSLLAQNLEPVDRLEALLYSSVYLKWINTGQIPCFEDGGHHRPSRHAEISKLIFCDLERMIHEKNASSKDILVIRKIHPCLPSFKSEFTASVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLVATEAMLAKITKTPGQYSQSFIDQFKVFYRELKDFFNAGSLTELLDSIKESLDDQKSALNLFLKCKTKLEDFSKEQPRGDCIASLLINALESLTNLRSLIVKALKSGLRNDAPDTAIAMRQKWRLCEIGLEKYSFVLLSRFINELEAMGGSTWLAHNVTLRSIGPWNDPLCALIVGIRQVGLSDWRQEECNAIENEILAWKLGLSEREGNEDGKRVWALRLKATLDRARRMTEDYSEVLLQIFPDKVERLGQALGIPSNSVRTYTEAEIRSSVTFQISKLCTLLLKALQIALGTLGWDVLVPGVAYGTLLQIESINPGSLPSSTEGPVILAVKRATGDEEVKAAGSNIVGVILLQELPHLSHLGVRARQEKVVFVTCENEEEIAKFQALEGKHVRLEASTTRVNLSAFSLKDSEEKLFIGPAGNGTSMQKYSALSFSPTDVSTPLLTKVSASVLELSKTDIDSCGAKATSCGSLAALASISEKVLTDQGIPATFKVPAGAVLPFGSMEAMLKQTGSLDSFLSLLKRIETANLDGGELDRLCSDLQALILAHVPSQETIKAINRIIPSNARLIVRSSANVEDLAGMSAAGLYESIPNVSLSSPTIFGSAVSRVWASLYTRRAILSRRAAGVPQWKAQMAVLLQQMPSPSLSFVLHTVSPAEHDPKLVMAEIASGLGETLASGTRGVPWRLSCNKFDGEVCTLAFANFSEELLVLDSRPADGEVSRLTVDYSKKPITLDPIYRKQLGQRLCAIGSLLEQKYGCPQDVEGCVVGNDIFIVQTRPQP

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	CBM20

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016310	Biological Process	phosphorylation
GO:0030246	Molecular Function	carbohydrate binding
GO:2001070	Molecular Function	starch binding
GO:0016301	Molecular Function	kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	47.720
SRP064423	SRR2545915	Juvenile tuber	70.120
SRP108465	SRR5643513	five period of Gastrodia elata	73.640
	SRR5643514	five period of Gastrodia elata	81.000
	SRR5643515	five period of Gastrodia elata	81.660
	SRR5643524	five period of Gastrodia elata	77.470
	SRR5643525	five period of Gastrodia elata	63.690
	SRR5643528	five period of Gastrodia elata	69.860
	SRR5643658	five period of Gastrodia elata	83.300
	SRR5643659	five period of Gastrodia elata	98.230
	SRR5643660	five period of Gastrodia elata	106.710
	SRR5643661	five period of Gastrodia elata	99.520
	SRR5643662	five period of Gastrodia elata	104.630
	SRR5643663	five period of Gastrodia elata	121.870
	SRR5643664	five period of Gastrodia elata	117.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	75.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	53.190
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	69.950
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	68.580
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	59.940
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	59.290
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	55.050
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	59.070
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	49.690
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	48.530
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	54.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	54.440
SRP279888	Gastro	Gastrodia elata tuber	92.34
	Juven	Juvenile tuber	96.89
	Mother_Gastro	Mother tuber of Gastrodia elata	56.04
	Mother_Juven	Mother tuber of Juvenile	63.90