Detail information of GWHGAAEX013791/evm.TU.scaffold_54.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672130261|ref|XP_008788658.1|0PREDICTED: protein SCAI [Phoenix dactylifera]
trEMBLtr|M0U7A2|M0U7A2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP07910_001}
TAIRAT3G035700Protein of unknown function (DUF3550/UPF0682)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005937060496+
Transcript Sequence

Network for GWHGAAEX013791

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12070.7SCAI153391.40E-127
PF12070.7SCAI3565062.30E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006351Biological Processtranscription, DNA-templated
GO:0003714Molecular Functiontranscription corepressor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.240
SRR2545915Juvenile tuber42.660
SRP108465SRR5643513five period of Gastrodia elata17.430
SRR5643514five period of Gastrodia elata15.710
SRR5643515five period of Gastrodia elata16.810
SRR5643524five period of Gastrodia elata13.250
SRR5643525five period of Gastrodia elata18.510
SRR5643528five period of Gastrodia elata16.450
SRR5643658five period of Gastrodia elata23.830
SRR5643659five period of Gastrodia elata14.040
SRR5643660five period of Gastrodia elata15.170
SRR5643661five period of Gastrodia elata12.860
SRR5643662five period of Gastrodia elata11.710
SRR5643663five period of Gastrodia elata12.450
SRR5643664five period of Gastrodia elata11.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.570
SRR6049655Rhizomagastrodiae_C368-T10_good_115.300
SRR6049656Rhizomagastrodiae_C368-T07_good_120.510
SRR6049657Rhizomagastrodiae_C368-T07_good_126.320
SRR6049658Rhizomagastrodiae_C368-T04_good_123.910
SRR6049659Rhizomagastrodiae_C368-T04_good_121.470
SRR6049660Rhizomagastrodiae_C368-T01_good_126.370
SRR6049661Rhizomagastrodiae_C368-T04_good_123.820
SRR6049662Rhizomagastrodiae_C368-T01_good_114.610
SRR6049663Rhizomagastrodiae_C368-T01_good_115.900
SRR6049664Rhizomagastrodiae_C368-T10_good_115.480
SRR6049665Rhizomagastrodiae_C368-T10_good_115.480
SRP279888GastroGastrodia elata tuber 22.11
JuvenJuvenile tuber23.47
Mother_GastroMother tuber of Gastrodia elata 22.05
Mother_JuvenMother tuber of Juvenile 17.97