Detail information of GWHGAAEX013794/evm.TU.scaffold_54.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720061660|ref|XP_010275243.1|8.59E-88PREDICTED: putative DNA-binding protein ESCAROLA [Nelumbo nucifera]
Swissprottr|Q9S7C9|ESCA_ARATH2.00E-41Putative DNA-binding protein ESCAROLA
trEMBLtr|A5C6L7|A5C6L7_VITVI9.00E-88Putative uncharacterized protein {ECO:0000313|EMBL:CAN83987.1}
TAIRAT2G352704.00E-74Predicted AT-hook DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000059155426156449-
Transcript Sequence

Network for GWHGAAEX013794

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03479.14DUF296821931.20E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.880
SRR2545915Juvenile tuber4.100
SRP108465SRR5643513five period of Gastrodia elata35.730
SRR5643514five period of Gastrodia elata26.250
SRR5643515five period of Gastrodia elata32.470
SRR5643524five period of Gastrodia elata34.410
SRR5643525five period of Gastrodia elata25.190
SRR5643528five period of Gastrodia elata37.710
SRR5643658five period of Gastrodia elata18.830
SRR5643659five period of Gastrodia elata6.840
SRR5643660five period of Gastrodia elata12.370
SRR5643661five period of Gastrodia elata9.020
SRR5643662five period of Gastrodia elata9.900
SRR5643663five period of Gastrodia elata5.180
SRR5643664five period of Gastrodia elata3.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.530
SRR6049655Rhizomagastrodiae_C368-T10_good_127.740
SRR6049656Rhizomagastrodiae_C368-T07_good_120.010
SRR6049657Rhizomagastrodiae_C368-T07_good_111.380
SRR6049658Rhizomagastrodiae_C368-T04_good_118.540
SRR6049659Rhizomagastrodiae_C368-T04_good_116.190
SRR6049660Rhizomagastrodiae_C368-T01_good_115.920
SRR6049661Rhizomagastrodiae_C368-T04_good_115.300
SRR6049662Rhizomagastrodiae_C368-T01_good_123.070
SRR6049663Rhizomagastrodiae_C368-T01_good_118.090
SRR6049664Rhizomagastrodiae_C368-T10_good_127.460
SRR6049665Rhizomagastrodiae_C368-T10_good_127.460
SRP279888GastroGastrodia elata tuber 4.62
JuvenJuvenile tuber11.78
Mother_GastroMother tuber of Gastrodia elata 192.13
Mother_JuvenMother tuber of Juvenile 63.77