Detail information of GWHGAAEX013798/evm.TU.scaffold_54.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32495.00E-81Uncharacterized conserved protein
nrgi|743855080|ref|XP_010941219.1|1.48E-107PREDICTED: uncharacterized protein LOC105059579 [Elaeis guineensis]
trEMBLtr|B9N2Q0|B9N2Q0_POPTR1.00E-90Ubiquitin family protein {ECO:0000313|EMBL:ERP63423.1}
TAIRAT2G353605.00E-81ubiquitin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000059225125230391+
Transcript Sequence

Network for GWHGAAEX013798

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10260.8SAYSvFN1472132.70E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms97.150
SRR2545915Juvenile tuber107.170
SRP108465SRR5643513five period of Gastrodia elata54.150
SRR5643514five period of Gastrodia elata57.480
SRR5643515five period of Gastrodia elata50.230
SRR5643524five period of Gastrodia elata52.360
SRR5643525five period of Gastrodia elata48.390
SRR5643528five period of Gastrodia elata40.890
SRR5643658five period of Gastrodia elata37.130
SRR5643659five period of Gastrodia elata55.120
SRR5643660five period of Gastrodia elata54.940
SRR5643661five period of Gastrodia elata68.730
SRR5643662five period of Gastrodia elata73.590
SRR5643663five period of Gastrodia elata67.730
SRR5643664five period of Gastrodia elata76.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.120
SRR6049655Rhizomagastrodiae_C368-T10_good_152.770
SRR6049656Rhizomagastrodiae_C368-T07_good_126.200
SRR6049657Rhizomagastrodiae_C368-T07_good_150.040
SRR6049658Rhizomagastrodiae_C368-T04_good_147.600
SRR6049659Rhizomagastrodiae_C368-T04_good_155.160
SRR6049660Rhizomagastrodiae_C368-T01_good_135.720
SRR6049661Rhizomagastrodiae_C368-T04_good_139.910
SRR6049662Rhizomagastrodiae_C368-T01_good_127.990
SRR6049663Rhizomagastrodiae_C368-T01_good_131.030
SRR6049664Rhizomagastrodiae_C368-T10_good_130.700
SRR6049665Rhizomagastrodiae_C368-T10_good_130.700
SRP279888GastroGastrodia elata tuber 54.01
JuvenJuvenile tuber57.79
Mother_GastroMother tuber of Gastrodia elata 102.25
Mother_JuvenMother tuber of Juvenile 76.05