Gene detail

Detail information of GWHGAAEX013803/evm.TU.scaffold_54.9

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2654	2.00E-112	Uncharacterized conserved protein
nr	gi\|743855050\|ref\|XP_010941204.1\|	2.06E-157	PREDICTED: BUD13 homolog [Elaeis guineensis]
trEMBL	tr\|M0U661\|M0U661_MUSAM	1.00E-155	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP03990_001}
TAIR	AT1G31870	2.00E-112	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000059	361724	395671	-

Transcript Sequence
>GWHTAAEX013803 AAAAAAAAAAAAAAAAAAAAACCCGGCTCCGGCTGAATGGCCGGTTCGGATATGGAAACAATGGAGTTTCTCAGGAGGAGGCGTGTGTGCTCGCAGCTATGGGCTATCTCCTGCTCCTGTAGAACCCTAGAATTCCGGCAATTATCATCTTCGTAGCCGTTTCCCCAGGGTTTCTACGCAGGAACTGACGATGGCCGCGCCTTCCTCGTCCCTTCCCCTCAAAGAATACCTCAAGAGATACCAGACCTGCGGTGACGAGCCGAAGAAGGCAAAGAAAAAGAAAAAGAAAGAGAACACTAAGTCTCTGTCCACCGGCGGCAGAGTTCTCGTACTTGACGGCGATCCTGTCTGGCAGAAGCCCGTGCTGGTTGAGAATGCCGAGGAAGACAATTCCGCGGGTGAGGAGGCGCCTCAGATAGAGGAAGATGTAGAGGTTAAGAGGATGAAGAGGCTTGAGGCTCTTCGCTCTCGTAAACCTTATCATAGCATTAATGAAGATGGAAGCGGGTGGATATCAGTTTCTAGCTTCCCCATAATCCGAGATATTTCGCCTCAGCCGAATCAACATGATGAAAATTCAGTTGAAGTGGACACGGATCTGCCTCACCCACGCCAGAGGCAGCGCCGTTTGGACACGCCTTCTCCTGAGCGTCAGTTAAGCGGGACTGGAGCGGAGGCTAGCGATCTTTCTCCTCCTAGAAGGCAGCGCGTTCAGGAATTCGAGGCAGGTAGAAATTTGCAAGACACCGATCTTTCACCCATGAGGAAACCTGGGAAGGAGCCCACAGATGATTTGTCTCCTCCTCGTAGATATCGTGAATCACTTGATGCTGAATCACATTCACTGAGCAGGACTGGGAAAGGGTCATTGATGGATTTGTCTCCTCCCAGGAAACCACGCTCTTCATCTACTGTAGATCTCTCTCCACCTAGGAAAACCAGGAAAAGGTCTCCGGATGATGTGCGGAGTTATGCTCTTACTGACCATCCACATAGGATGAAGAGTCGGTTTGAATCATCTGAGAATGCAAGTGTGATGTATACGGCACGCCATGAGTCACCAGAGGGTGGTAGGAACGCAAATTTGTCTGCACTTTCAGGAATTAAGGAGCTATCATTGTCTAAGGATGCAAGAAGGGCAAGTATGTTCTCAGATAAGGAATTTGGGGAAGGCACAGATAGGAGGAAGATGGAGGTGAAGTCTAGTATTACTTCACTTGATCCACTGCTTTCTCGAAGAGGTTCTGAAGTGGTGTATCGTGATAAACAAGGAAAAAGGACTTCAAAGGAGGAGTTGATGAAGTCAAAGGAAAAAAAGAAAGAGGAGAAGCCATTGGAATGGGGCAAGGGCTTAGCTCAAAAACGAGAAGCTGAAGAGAGAGTAAAAGAGCTTGAACTCGAGAAGGAGAAACCTTTTGCTCGTTCAAGGGATGATCCCGAGCTTGAGAAAATGTTGAAGGAGAGGATTAGATGGGGTGATCCAATGGCTTATTTGATTAAGAGGAACAGTTCAGAGCTAATTCTAGAAGATTTGGGTGAGAATGAGAAAATGAAAGATTCAGGTTTCATAGTTCCTCAGACTATTCCTAGCCACAGCTGGTTGAAACGGGGATTAGATTTTCCACTGAATCGATATAGCATTAGGCCTGGTAGACATTGGGATGGAGTGGATCGAAGCAACGGTTATGAGAAGGAACTATTTAAGAGGCAGAATGAAAAGCGGGCCACGGAGACTGAGGCATATTTGTGGTCTGTCTCTGATATGTGAGGATATTGAACATATGCATAGGCTTTTCTGCTGGACTGTTTGCTGCAATGCAGGATTTATACAAGGTACATTGGTTATTTCCCTGCATTAATCATAGGTTGACTTGATGAAAATATGCTTCTCTAAATTTACATACCGAGAACCCAAAGTTTCATATTTACAATTAAAGTGCTCTCATCTCATTATGTGTATATCAGAATAATTTCCTGCCTTGGATTCATTTTAATTATTAATGGAATGAGATTCCATCATTGGGTAATGTTGGGTGTTTTTTTTTGTAATTATAGCTGATATATGTATGTAAATTTTCATATTAGTGTTAATTAAACTATTGCTAAGTATATATTTGATTTCATACACTGGTCAAATGATGGCGTTTAAGTGCCAGTATTGATATGTGGGATAGAAGTTTGGTTGTGAAGTTTTTTCTTAAACTATTGTTTGTCCATTCTGTTGTTATAGGTGTTCTTAATTTTATGCATCTTACATAATCTTGC

Network for GWHGAAEX013803

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF09736.8	Bud13	353	508	1.30E-40

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	63.350
SRP064423	SRR2545915	Juvenile tuber	71.090
SRP108465	SRR5643513	five period of Gastrodia elata	69.990
	SRR5643514	five period of Gastrodia elata	65.850
	SRR5643515	five period of Gastrodia elata	66.460
	SRR5643524	five period of Gastrodia elata	63.960
	SRR5643525	five period of Gastrodia elata	79.680
	SRR5643528	five period of Gastrodia elata	65.730
	SRR5643658	five period of Gastrodia elata	89.690
	SRR5643659	five period of Gastrodia elata	84.440
	SRR5643660	five period of Gastrodia elata	94.720
	SRR5643661	five period of Gastrodia elata	87.940
	SRR5643662	five period of Gastrodia elata	96.910
	SRR5643663	five period of Gastrodia elata	87.330
	SRR5643664	five period of Gastrodia elata	96.010
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	56.630
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	61.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	52.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	67.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	55.960
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	67.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	63.430
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	54.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	42.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	48.630
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	51.980
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	51.980
SRP279888	Gastro	Gastrodia elata tuber	99.00
	Juven	Juvenile tuber	93.95
	Mother_Gastro	Mother tuber of Gastrodia elata	97.41
	Mother_Juven	Mother tuber of Juvenile	81.84