Detail information of GWHGAAEX013809/evm.TU.scaffold_54.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|222479736|ref|YP_002565973.1|4.00E-24NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239]
KOGKOG42888.00E-132Predicted oxidoreductase
nrgi|743861977|ref|XP_010943422.1|4.46E-143PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X1 [Elaeis guineensis]
Swissprottr|Q9FVR6|Y1222_ARATH2.00E-132Uncharacterized protein At1g32220, chloroplastic (Precursor)
trEMBLtr|M0SN94|M0SN94_MUSAM4.00E-138Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P12290_001}
TAIRAT1G322208.00E-132NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000059547751572498-
Transcript Sequence

Network for GWHGAAEX013809

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13460.5NAD_binding_101142571.30E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.030
SRR2545915Juvenile tuber56.930
SRP108465SRR5643513five period of Gastrodia elata63.510
SRR5643514five period of Gastrodia elata70.640
SRR5643515five period of Gastrodia elata59.660
SRR5643524five period of Gastrodia elata66.000
SRR5643525five period of Gastrodia elata43.370
SRR5643528five period of Gastrodia elata34.730
SRR5643658five period of Gastrodia elata38.360
SRR5643659five period of Gastrodia elata39.350
SRR5643660five period of Gastrodia elata33.730
SRR5643661five period of Gastrodia elata38.510
SRR5643662five period of Gastrodia elata44.760
SRR5643663five period of Gastrodia elata42.610
SRR5643664five period of Gastrodia elata36.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.000
SRR6049655Rhizomagastrodiae_C368-T10_good_151.600
SRR6049656Rhizomagastrodiae_C368-T07_good_159.050
SRR6049657Rhizomagastrodiae_C368-T07_good_148.280
SRR6049658Rhizomagastrodiae_C368-T04_good_144.810
SRR6049659Rhizomagastrodiae_C368-T04_good_138.680
SRR6049660Rhizomagastrodiae_C368-T01_good_146.950
SRR6049661Rhizomagastrodiae_C368-T04_good_143.740
SRR6049662Rhizomagastrodiae_C368-T01_good_168.850
SRR6049663Rhizomagastrodiae_C368-T01_good_152.530
SRR6049664Rhizomagastrodiae_C368-T10_good_172.770
SRR6049665Rhizomagastrodiae_C368-T10_good_172.770
SRP279888GastroGastrodia elata tuber 43.71
JuvenJuvenile tuber56.45
Mother_GastroMother tuber of Gastrodia elata 53.44
Mother_JuvenMother tuber of Juvenile 61.21