Detail information of GWHGAAEX013810/evm.TU.scaffold_54.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33901.00E-18General control of amino-acid synthesis 5-like 1
nrgi|743818792|ref|XP_010931329.1|1.67E-41PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Elaeis guineensis]
Swissprottr|O22929|BL1S1_ARATH4.00E-19Biogenesis of lysosome-related organelles complex 1 subunit 1
trEMBLtr|M0RMG0|M0RMG0_MUSAM6.00E-39Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P29360_001}
TAIRAT2G303301.00E-18GCN5L1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000059587016618576-
Transcript Sequence

Network for GWHGAAEX013810

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06320.12GCN5L11212056.40E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0031083Cellular ComponentBLOC-1 complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.730
SRR2545915Juvenile tuber31.570
SRP108465SRR5643513five period of Gastrodia elata10.660
SRR5643514five period of Gastrodia elata7.920
SRR5643515five period of Gastrodia elata9.490
SRR5643524five period of Gastrodia elata7.580
SRR5643525five period of Gastrodia elata6.480
SRR5643528five period of Gastrodia elata9.870
SRR5643658five period of Gastrodia elata10.320
SRR5643659five period of Gastrodia elata8.770
SRR5643660five period of Gastrodia elata8.930
SRR5643661five period of Gastrodia elata10.040
SRR5643662five period of Gastrodia elata10.290
SRR5643663five period of Gastrodia elata9.170
SRR5643664five period of Gastrodia elata14.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.450
SRR6049655Rhizomagastrodiae_C368-T10_good_18.890
SRR6049656Rhizomagastrodiae_C368-T07_good_17.340
SRR6049657Rhizomagastrodiae_C368-T07_good_110.030
SRR6049658Rhizomagastrodiae_C368-T04_good_111.360
SRR6049659Rhizomagastrodiae_C368-T04_good_113.040
SRR6049660Rhizomagastrodiae_C368-T01_good_18.600
SRR6049661Rhizomagastrodiae_C368-T04_good_110.250
SRR6049662Rhizomagastrodiae_C368-T01_good_18.620
SRR6049663Rhizomagastrodiae_C368-T01_good_15.880
SRR6049664Rhizomagastrodiae_C368-T10_good_16.660
SRR6049665Rhizomagastrodiae_C368-T10_good_16.660
SRP279888GastroGastrodia elata tuber 12.20
JuvenJuvenile tuber7.91
Mother_GastroMother tuber of Gastrodia elata 12.41
Mother_JuvenMother tuber of Juvenile 8.18