Detail information of GWHGAAEX013815/evm.TU.scaffold_54.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00482.00E-51Transcription factor, Myb superfamily
nrgi|695040124|ref|XP_009407626.1|9.50E-56PREDICTED: transcription factor MYB44 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9S7L2|MYB98_ARATH5.00E-52Transcription factor MYB98
trEMBLtr|M0REA4|M0REA4_MUSAM4.00E-56Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P00770_001}
TAIRAT4G187702.00E-51myb domain protein 98

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000059746607748932+
Transcript Sequence

Network for GWHGAAEX013815

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13921.5Myb_DNA-bind_6551151.50E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.730
SRR2545915Juvenile tuber1.330
SRP108465SRR5643513five period of Gastrodia elata1.570
SRR5643514five period of Gastrodia elata1.050
SRR5643515five period of Gastrodia elata1.470
SRR5643524five period of Gastrodia elata0.410
SRR5643525five period of Gastrodia elata4.000
SRR5643528five period of Gastrodia elata2.510
SRR5643658five period of Gastrodia elata2.840
SRR5643659five period of Gastrodia elata2.090
SRR5643660five period of Gastrodia elata1.700
SRR5643661five period of Gastrodia elata0.820
SRR5643662five period of Gastrodia elata2.590
SRR5643663five period of Gastrodia elata2.430
SRR5643664five period of Gastrodia elata6.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.080
SRR6049655Rhizomagastrodiae_C368-T10_good_11.180
SRR6049656Rhizomagastrodiae_C368-T07_good_12.370
SRR6049657Rhizomagastrodiae_C368-T07_good_14.320
SRR6049658Rhizomagastrodiae_C368-T04_good_13.260
SRR6049659Rhizomagastrodiae_C368-T04_good_14.600
SRR6049660Rhizomagastrodiae_C368-T01_good_14.330
SRR6049661Rhizomagastrodiae_C368-T04_good_12.810
SRR6049662Rhizomagastrodiae_C368-T01_good_11.600
SRR6049663Rhizomagastrodiae_C368-T01_good_13.430
SRR6049664Rhizomagastrodiae_C368-T10_good_12.190
SRR6049665Rhizomagastrodiae_C368-T10_good_12.190
SRP279888GastroGastrodia elata tuber 1.97
JuvenJuvenile tuber1.45
Mother_GastroMother tuber of Gastrodia elata 3.81
Mother_JuvenMother tuber of Juvenile 3.84