Detail information of GWHGAAEX013817/evm.TU.scaffold_54.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17251.00E-41Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family)
nrgi|685283574|ref|XP_009132697.1|3.38E-52PREDICTED: HVA22-like protein e [Brassica rapa]
Swissprottr|Q9FED2|HA22E_ARATH1.00E-51HVA22-like protein e
trEMBLtr|A0A078DC51|A0A078DC51_BRANA2.00E-51BnaA03g13570D protein {ECO:0000313|EMBL:CDX84873.1}
TAIRAT5G507201.00E-41HVA22 homologue E

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000059878059883379-
Transcript Sequence

Network for GWHGAAEX013817

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03134.18TB2_DP1_HVA2224983.50E-29
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.080
SRR2545915Juvenile tuber1.880
SRP108465SRR5643513five period of Gastrodia elata12.580
SRR5643514five period of Gastrodia elata9.730
SRR5643515five period of Gastrodia elata8.940
SRR5643524five period of Gastrodia elata11.040
SRR5643525five period of Gastrodia elata33.360
SRR5643528five period of Gastrodia elata26.090
SRR5643658five period of Gastrodia elata32.660
SRR5643659five period of Gastrodia elata9.360
SRR5643660five period of Gastrodia elata12.140
SRR5643661five period of Gastrodia elata12.530
SRR5643662five period of Gastrodia elata13.090
SRR5643663five period of Gastrodia elata14.770
SRR5643664five period of Gastrodia elata16.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.130
SRR6049655Rhizomagastrodiae_C368-T10_good_19.570
SRR6049656Rhizomagastrodiae_C368-T07_good_111.710
SRR6049657Rhizomagastrodiae_C368-T07_good_18.090
SRR6049658Rhizomagastrodiae_C368-T04_good_17.930
SRR6049659Rhizomagastrodiae_C368-T04_good_19.790
SRR6049660Rhizomagastrodiae_C368-T01_good_15.170
SRR6049661Rhizomagastrodiae_C368-T04_good_18.950
SRR6049662Rhizomagastrodiae_C368-T01_good_17.380
SRR6049663Rhizomagastrodiae_C368-T01_good_17.980
SRR6049664Rhizomagastrodiae_C368-T10_good_111.460
SRR6049665Rhizomagastrodiae_C368-T10_good_111.460
SRP279888GastroGastrodia elata tuber 17.56
JuvenJuvenile tuber13.65
Mother_GastroMother tuber of Gastrodia elata 27.43
Mother_JuvenMother tuber of Juvenile 20.63