Detail information of GWHGAAEX013831/evm.TU.scaffold_54.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743884758|ref|XP_010909766.1|0PREDICTED: uncharacterized protein LOC105035770 [Elaeis guineensis]
Swissprottr|Q8RWD5|SCD2_ARATH0Coiled-coil domain-containing protein SCD2 {ECO:0000305}
trEMBLtr|U5FUG8|U5FUG8_POPTR0Uncharacterized protein {ECO:0000313|EMBL:ERP54715.1}
TAIRAT3G488600Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005912258631295736+
Transcript Sequence

Network for GWHGAAEX013831

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.410
SRR2545915Juvenile tuber18.140
SRP108465SRR5643513five period of Gastrodia elata20.370
SRR5643514five period of Gastrodia elata22.050
SRR5643515five period of Gastrodia elata22.160
SRR5643524five period of Gastrodia elata22.220
SRR5643525five period of Gastrodia elata26.780
SRR5643528five period of Gastrodia elata30.060
SRR5643658five period of Gastrodia elata25.900
SRR5643659five period of Gastrodia elata21.080
SRR5643660five period of Gastrodia elata19.530
SRR5643661five period of Gastrodia elata20.120
SRR5643662five period of Gastrodia elata19.480
SRR5643663five period of Gastrodia elata19.460
SRR5643664five period of Gastrodia elata20.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.170
SRR6049655Rhizomagastrodiae_C368-T10_good_125.700
SRR6049656Rhizomagastrodiae_C368-T07_good_124.090
SRR6049657Rhizomagastrodiae_C368-T07_good_119.820
SRR6049658Rhizomagastrodiae_C368-T04_good_124.850
SRR6049659Rhizomagastrodiae_C368-T04_good_123.620
SRR6049660Rhizomagastrodiae_C368-T01_good_121.440
SRR6049661Rhizomagastrodiae_C368-T04_good_124.570
SRR6049662Rhizomagastrodiae_C368-T01_good_124.630
SRR6049663Rhizomagastrodiae_C368-T01_good_124.400
SRR6049664Rhizomagastrodiae_C368-T10_good_124.490
SRR6049665Rhizomagastrodiae_C368-T10_good_124.490
SRP279888GastroGastrodia elata tuber 22.68
JuvenJuvenile tuber25.04
Mother_GastroMother tuber of Gastrodia elata 34.93
Mother_JuvenMother tuber of Juvenile 34.44