Detail information of GWHGAAEX013832/evm.TU.scaffold_54.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15672552|ref|NP_266726.1|1.00E-10hypothetical protein L165449 [Lactococcus lactis subsp. lactis Il1403]
KOGKOG31899.00E-140Phosphomannomutase
nrgi|672173416|ref|XP_008806840.1|6.61E-147PREDICTED: phosphomannomutase [Phoenix dactylifera]
Swissprottr|Q7XPW5|PMM_ORYSJ2.00E-144Phosphomannomutase
trEMBLtr|D7UC38|D7UC38_VITVI3.00E-146Phosphomannomutase {ECO:0000256|RuleBase:RU361118}
TAIRAT2G457909.00E-140phosphomannomutase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005913006921324877+
Transcript Sequence

Network for GWHGAAEX013832

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03332.12PMM252391.20E-107
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17497PMM Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Fructose and mannose metabolismmap00051
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0009298Biological ProcessGDP-mannose biosynthetic process
GO:0004615Molecular Functionphosphomannomutase activity
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms116.180
SRR2545915Juvenile tuber125.550
SRP108465SRR5643513five period of Gastrodia elata148.650
SRR5643514five period of Gastrodia elata178.650
SRR5643515five period of Gastrodia elata152.610
SRR5643524five period of Gastrodia elata179.580
SRR5643525five period of Gastrodia elata203.310
SRR5643528five period of Gastrodia elata183.940
SRR5643658five period of Gastrodia elata203.600
SRR5643659five period of Gastrodia elata115.930
SRR5643660five period of Gastrodia elata111.420
SRR5643661five period of Gastrodia elata116.290
SRR5643662five period of Gastrodia elata106.480
SRR5643663five period of Gastrodia elata112.830
SRR5643664five period of Gastrodia elata103.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1161.620
SRR6049655Rhizomagastrodiae_C368-T10_good_1178.970
SRR6049656Rhizomagastrodiae_C368-T07_good_1171.520
SRR6049657Rhizomagastrodiae_C368-T07_good_1152.310
SRR6049658Rhizomagastrodiae_C368-T04_good_1132.330
SRR6049659Rhizomagastrodiae_C368-T04_good_1128.620
SRR6049660Rhizomagastrodiae_C368-T01_good_1139.850
SRR6049661Rhizomagastrodiae_C368-T04_good_1140.260
SRR6049662Rhizomagastrodiae_C368-T01_good_1164.650
SRR6049663Rhizomagastrodiae_C368-T01_good_1141.980
SRR6049664Rhizomagastrodiae_C368-T10_good_1192.030
SRR6049665Rhizomagastrodiae_C368-T10_good_1192.030
SRP279888GastroGastrodia elata tuber 106.09
JuvenJuvenile tuber120.39
Mother_GastroMother tuber of Gastrodia elata 104.98
Mother_JuvenMother tuber of Juvenile 110.41