Detail information of GWHGAAEX013843/evm.TU.scaffold_54.48
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|111025059|ref|YP_707479.1| | 7.00E-131 | transaldolase [Rhodococcus jostii RHA1] |
| KOG | KOG2772 | 0 | Transaldolase |
| nr | gi|672195117|ref|XP_008776466.1| | 0 | PREDICTED: uncharacterized protein LOC103696573 [Phoenix dactylifera] |
| Swissprot | tr|P86071|TALDO_CAPAA | 1.00E-06 | Transaldolase {ECO:0000250|UniProtKB:P48983} (Fragments) |
| trEMBL | tr|M0S9Y3|M0S9Y3_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P21420_001} |
| TAIR | AT5G13420 | 0 | Aldolase-type TIM barrel family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000059 | 1576148 | 1598584 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013843
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00923.18 | TAL_FSA | 105 | 426 | 2.50E-76 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0006098 | Biological Process | pentose-phosphate shunt |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0004801 | Molecular Function | sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 374.780 |
| SRR2545915 | Juvenile tuber | 569.890 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 286.510 |
| SRR5643514 | five period of Gastrodia elata | 274.000 | |
| SRR5643515 | five period of Gastrodia elata | 307.530 | |
| SRR5643524 | five period of Gastrodia elata | 283.170 | |
| SRR5643525 | five period of Gastrodia elata | 198.960 | |
| SRR5643528 | five period of Gastrodia elata | 404.130 | |
| SRR5643658 | five period of Gastrodia elata | 302.870 | |
| SRR5643659 | five period of Gastrodia elata | 434.810 | |
| SRR5643660 | five period of Gastrodia elata | 398.040 | |
| SRR5643661 | five period of Gastrodia elata | 399.080 | |
| SRR5643662 | five period of Gastrodia elata | 441.390 | |
| SRR5643663 | five period of Gastrodia elata | 485.790 | |
| SRR5643664 | five period of Gastrodia elata | 457.660 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 344.980 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 264.280 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 309.340 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 394.550 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 346.810 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 416.420 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 361.950 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 364.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 321.600 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 289.980 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 255.310 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 255.310 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 460.96 |
| Juven | Juvenile tuber | 337.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 265.98 | |
| Mother_Juven | Mother tuber of Juvenile | 385.14 |