Detail information of GWHGAAEX013846/evm.TU.scaffold_54.51
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|470171097|ref|YP_007551983.1| | 3.00E-22 | NADH-flavin oxidoreductase/NADH oxidase [Azoarcus sp. KH32C] |
| KOG | KOG0134 | 7.00E-30 | NADH:flavin oxidoreductase/12-oxophytodienoate reductase |
| nr | gi|593797446|ref|XP_007161761.1| | 3.95E-31 | hypothetical protein PHAVU_001G096300g [Phaseolus vulgaris] |
| Swissprot | tr|P0DI09|ORL2B_ARATH | 6.00E-31 | Putative 12-oxophytodienoate reductase-like protein 2B |
| trEMBL | tr|V7CWV8|V7CWV8_PHAVU | 1.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:ESW33755.1} |
| TAIR | AT1G76690 | 7.00E-30 | 12-oxophytodienoate reductase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000059 | 1604869 | 1605225 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013846
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00724.19 | Oxidored_FMN | 29 | 97 | 9.40E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05894 | OPR | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0010181 | Molecular Function | FMN binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 92.100 |
| SRR2545915 | Juvenile tuber | 13.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 104.520 |
| SRR5643514 | five period of Gastrodia elata | 122.660 | |
| SRR5643515 | five period of Gastrodia elata | 45.650 | |
| SRR5643524 | five period of Gastrodia elata | 86.060 | |
| SRR5643525 | five period of Gastrodia elata | 24.080 | |
| SRR5643528 | five period of Gastrodia elata | 15.060 | |
| SRR5643658 | five period of Gastrodia elata | 12.240 | |
| SRR5643659 | five period of Gastrodia elata | 5.730 | |
| SRR5643660 | five period of Gastrodia elata | 10.180 | |
| SRR5643661 | five period of Gastrodia elata | 4.140 | |
| SRR5643662 | five period of Gastrodia elata | 2.900 | |
| SRR5643663 | five period of Gastrodia elata | 1.050 | |
| SRR5643664 | five period of Gastrodia elata | 3.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 156.310 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 217.430 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 183.310 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 227.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 217.400 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 224.650 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 221.260 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 223.800 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 140.990 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 101.610 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 160.960 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 160.960 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.33 |
| Juven | Juvenile tuber | 166.37 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.28 | |
| Mother_Juven | Mother tuber of Juvenile | 36.95 |