Detail information of GWHGAAEX013848/evm.TU.scaffold_54.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158422844|ref|YP_001524136.1|8.00E-11hypothetical protein AZC_1220 [Azorhizobium caulinodans ORS 571]
KOGKOG33262.00E-54Uncharacterized conserved protein
nrgi|672147479|ref|XP_008797117.1|1.06E-74PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Phoenix dactylifera]
trEMBLtr|M0TR10|M0TR10_MUSAM2.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P16570_001}
TAIRAT5G510402.00E-54Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005916378621657808-
Transcript Sequence

Network for GWHGAAEX013848

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03937.15Sdh5551263.00E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms83.930
SRR2545915Juvenile tuber104.270
SRP108465SRR5643513five period of Gastrodia elata102.660
SRR5643514five period of Gastrodia elata111.670
SRR5643515five period of Gastrodia elata88.780
SRR5643524five period of Gastrodia elata102.750
SRR5643525five period of Gastrodia elata86.450
SRR5643528five period of Gastrodia elata81.520
SRR5643658five period of Gastrodia elata88.150
SRR5643659five period of Gastrodia elata121.140
SRR5643660five period of Gastrodia elata138.730
SRR5643661five period of Gastrodia elata135.400
SRR5643662five period of Gastrodia elata147.990
SRR5643663five period of Gastrodia elata147.010
SRR5643664five period of Gastrodia elata172.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1114.870
SRR6049655Rhizomagastrodiae_C368-T10_good_1183.440
SRR6049656Rhizomagastrodiae_C368-T07_good_189.810
SRR6049657Rhizomagastrodiae_C368-T07_good_1117.930
SRR6049658Rhizomagastrodiae_C368-T04_good_176.550
SRR6049659Rhizomagastrodiae_C368-T04_good_196.470
SRR6049660Rhizomagastrodiae_C368-T01_good_184.870
SRR6049661Rhizomagastrodiae_C368-T04_good_171.820
SRR6049662Rhizomagastrodiae_C368-T01_good_168.250
SRR6049663Rhizomagastrodiae_C368-T01_good_157.900
SRR6049664Rhizomagastrodiae_C368-T10_good_1103.110
SRR6049665Rhizomagastrodiae_C368-T10_good_1103.110
SRP279888GastroGastrodia elata tuber 146.21
JuvenJuvenile tuber152.35
Mother_GastroMother tuber of Gastrodia elata 99.62
Mother_JuvenMother tuber of Juvenile 111.44