Detail information of GWHGAAEX013851/evm.TU.scaffold_54.56
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|521464512|ref|YP_008151634.1| | 1.00E-26 | hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2] |
| nr | gi|731404233|ref|XP_010655366.1| | 0 | PREDICTED: chitin elicitor receptor kinase 1-like isoform X1 [Vitis vinifera] |
| Swissprot | tr|A8R7E6|CERK1_ARATH | 0 | Chitin elicitor receptor kinase 1 (Precursor) |
| trEMBL | tr|D7TEC1|D7TEC1_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI28844.3} |
| TAIR | AT3G21630 | 0 | chitin elicitor receptor kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000059 | 1660847 | 1700064 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013851
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 326 | 592 | 2.00E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LysM |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13429 | CERK1 | Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.880 |
| SRR2545915 | Juvenile tuber | 22.500 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 26.020 |
| SRR5643514 | five period of Gastrodia elata | 29.140 | |
| SRR5643515 | five period of Gastrodia elata | 26.690 | |
| SRR5643524 | five period of Gastrodia elata | 32.980 | |
| SRR5643525 | five period of Gastrodia elata | 31.100 | |
| SRR5643528 | five period of Gastrodia elata | 25.720 | |
| SRR5643658 | five period of Gastrodia elata | 34.840 | |
| SRR5643659 | five period of Gastrodia elata | 22.140 | |
| SRR5643660 | five period of Gastrodia elata | 22.510 | |
| SRR5643661 | five period of Gastrodia elata | 22.790 | |
| SRR5643662 | five period of Gastrodia elata | 22.450 | |
| SRR5643663 | five period of Gastrodia elata | 22.290 | |
| SRR5643664 | five period of Gastrodia elata | 26.680 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 27.220 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 42.940 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 31.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 24.850 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.980 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.310 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.260 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.770 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.070 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 24.610 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 35.490 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 35.490 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 24.97 |
| Juven | Juvenile tuber | 40.36 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 48.44 | |
| Mother_Juven | Mother tuber of Juvenile | 46.57 |