Gene detail

Detail information of GWHGAAEX013865/evm.TU.scaffold_54.69

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695044465\|ref\|XP_009409984.1\|	6.17E-27	PREDICTED: wiskott-Aldrich syndrome protein family member 2-like [Musa acuminata subsp. malaccensis]
trEMBL	tr\|F6HJ81\|F6HJ81_VITVI	4.00E-26	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB52278.1}
TAIR	AT3G16510	1.00E-10	Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000059	1942427	1944568	-

Transcript Sequence
>GWHTAAEX013865 CTGAAATAAATTTTTTATTATATTTTTATTTGTTTATAAATTAAATTTTATTAAATAATAATATCATAACCAATTAAATAGAAACTCTTTGCACCCCCCGTAAATGTAACGTTCTCTTTTCTTTCTTATTTCGTTTTGAATGTGAAGAAGGTAAGAGTTTCCGCTCCCTTTCGCGCGAAGAAACCGGACGGCGTCAACGCGTCGCTATCTCATTTGCCAGCCACCCATCTTAAAATGCGCCTGCGGGGACATCGTCAGCGTCGCCCAAATCAGTACCCAAGCGCGATGGACGGAAGGGGGCGCATAGAGCTGGAATCCATCTCCTGCCGAGGAGTGAAAGCATTCTTCAACCTCTTCCAAAAACCCTCCGCCTATGCCGTCGTCTCCATTGCCTCCGCCGCTGTTGACGGCCGACAGAAACGCAACCTGCAGAGCCAGAAGACGTCGGCCGACCACAAAGGCGGCGAGAATCCAGAATGGGATCAGATCATCCGATTCGCTCTCGACGAGGGGGATTTCCCGGATCTTTATCTTGAATTCTCGATCAAGACACAGGGCAGCTTCCCCCTGCTCGGCTCCAGAGTCATCGGAAAGTCCCGGGTTCGGATCACCGATTTGTCCGACGGATACTCTTCCGATGAAGTCCGACGCGCCAGCTATCAGATTCGATGCCCCGAAAGCAAGCCCAACGGCATCCTGACCTTCTCCTATAAGATGAATCTTCCCGGGATCGAGTCCCGCGCTGCTCCAATCCCGCCGAAGATCAATCTTCCGTCTCTCGATCAAAGGCACCCTTCTCCTCCTGCGCCGAAGCTCGATTCAGGGTACCATTCTCTTCCGCCTCTCCATCAAGAGTTGTCTCCTCCATTGCCATTTGTTCAGGAGTTTCCTTCTGCTCCAACGTCTGATCTGGGGTTTTCACATTCACAACCGTTCGATCGGGGTTTTCCACCTGCTCCGCCGTTTGTTCAGGCGTTTCCTCCTGGTCCACTGCCCGATATGGGGTTTTCACCATCGCAACCGTTCGATCGAGAGATTCCTCCTGCTCCACCGCCGGATATGGGGTTTTCACCTTCGCAACCGTTCGATCGGGAGATTCCTCCTGCTCCACAGCCCAATCTGGGGTTTTCATCTTCACAACAGTTCGATCGGGGTTTTCCTCCTGCTCCACCGTTTGCTCAGTCGTTTCCTCCTGCTCCACCGCCCGATCTGGGTTTTTCACCTTCACAACCGTTCGATTGGGGTTTTCCTTATCCGCCGCCGCCATTTGCTCGGGCGTTTCCTCCTGTTCCACCGCTTGATCTTAGGTTTTCGCCTTCACAACCGTTCGATCGAGGTTTTTCTCCTGCTCAGTCGTTCGATTTAGGGATTCCTCCGGCTCCACCGCTGGATCGGGGAATTCCTTCGGCTCCGCCTATCGATAACTATGGATCTTGGCCGGCGCTGAGGGTAAGTATTTATCCGCCTCTACCGATGGCGGGAGCAGAGCCCGAGGACTGTTTCTGCTATCCTCCACCGTCGGCATGGAACGGGCGGGGATTGAGCCGGCATGCCTCTTTCTCTGGACCTGAGTTCTCGAATGGGAGCGGTTATACTCAGCCGGCGGCGACAGCGCCGTCGCCGGCGTTTGGGACGACGACATGTCCGCCGTCGACTTCCTGTGGTTATCTTTATCCGCCGCCTCAAGGTTCGTGCGATTACTGCAATTGAGAGCGAACTTGCTTGATATAATCAACGCATGTAATTGGTTCCATGTGATTTACGAATGTGAAGGAAGCGTGGAAGAAATATTCTCGGAGATTTCTTTTTTATAAATGGGCGAGTTTTTGTTTGCACATTCAAAGAAGATTCATGCAATTGGTCTCTAATGTTGGTGAAAGTATTAGGAAATAAGATAATGTTTAATCTGCTCTTAATCGTACGATTAATTCTGTATGCATGCACCATCTAAGACTATATTATTCAATCTTATCTACTATTGGAACGCAGATCCATTTCTCTTTATATCTATACTCCCACTCGAGTCCACTTAAGCTTTCTCGAGCTCTCCTCCATTTCGTTCAACCAGCTCGGACTTTGTTAAGAATATTGCTACACTCACACACTCATATACATCAAATATATAGATGATGTGTCAATCTA

Network for GWHGAAEX013865

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00168.29	C2	23	133	4.10E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.800
SRP064423	SRR2545915	Juvenile tuber	21.950
SRP108465	SRR5643513	five period of Gastrodia elata	20.530
	SRR5643514	five period of Gastrodia elata	17.880
	SRR5643515	five period of Gastrodia elata	43.840
	SRR5643524	five period of Gastrodia elata	19.520
	SRR5643525	five period of Gastrodia elata	37.390
	SRR5643528	five period of Gastrodia elata	76.900
	SRR5643658	five period of Gastrodia elata	19.100
	SRR5643659	five period of Gastrodia elata	56.670
	SRR5643660	five period of Gastrodia elata	33.780
	SRR5643661	five period of Gastrodia elata	57.210
	SRR5643662	five period of Gastrodia elata	71.520
	SRR5643663	five period of Gastrodia elata	39.920
	SRR5643664	five period of Gastrodia elata	191.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	38.910
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	77.290
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	28.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.180
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	26.060
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	30.470
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	27.020
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	25.510
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	35.700
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	46.680
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	46.680
SRP279888	Gastro	Gastrodia elata tuber	19.69
	Juven	Juvenile tuber	6.02
	Mother_Gastro	Mother tuber of Gastrodia elata	40.98
	Mother_Juven	Mother tuber of Juvenile	18.49