Detail information of GWHGAAEX013867/evm.TU.scaffold_54.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|197104020|ref|YP_002129397.1|2.00E-55peroxiredoxin [Phenylobacterium zucineum HLK1]
KOGKOG05414.00E-84Alkyl hydroperoxide reductase/peroxiredoxin
nrgi|356572518|ref|XP_003554415.1|6.00E-95PREDICTED: peroxiredoxin-2E, chloroplastic-like [Glycine max]
Swissprottr|Q949U7|PRX2E_ARATH1.00E-84Peroxiredoxin-2E, chloroplastic (Precursor)
trEMBLtr|I1NAI6|I1NAI6_SOYBN2.00E-95Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G37500.3}
TAIRAT3G529604.00E-84Thioredoxin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005919839731985429+
Transcript Sequence

Network for GWHGAAEX013867

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08534.9Redoxin692241.90E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.290
SRR2545915Juvenile tuber28.460
SRP108465SRR5643513five period of Gastrodia elata53.590
SRR5643514five period of Gastrodia elata56.660
SRR5643515five period of Gastrodia elata54.930
SRR5643524five period of Gastrodia elata51.140
SRR5643525five period of Gastrodia elata25.170
SRR5643528five period of Gastrodia elata25.820
SRR5643658five period of Gastrodia elata27.240
SRR5643659five period of Gastrodia elata68.910
SRR5643660five period of Gastrodia elata63.380
SRR5643661five period of Gastrodia elata65.620
SRR5643662five period of Gastrodia elata62.140
SRR5643663five period of Gastrodia elata64.210
SRR5643664five period of Gastrodia elata64.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.700
SRR6049655Rhizomagastrodiae_C368-T10_good_167.370
SRR6049656Rhizomagastrodiae_C368-T07_good_164.350
SRR6049657Rhizomagastrodiae_C368-T07_good_148.310
SRR6049658Rhizomagastrodiae_C368-T04_good_140.980
SRR6049659Rhizomagastrodiae_C368-T04_good_133.220
SRR6049660Rhizomagastrodiae_C368-T01_good_146.850
SRR6049661Rhizomagastrodiae_C368-T04_good_147.520
SRR6049662Rhizomagastrodiae_C368-T01_good_159.130
SRR6049663Rhizomagastrodiae_C368-T01_good_148.250
SRR6049664Rhizomagastrodiae_C368-T10_good_175.550
SRR6049665Rhizomagastrodiae_C368-T10_good_175.550
SRP279888GastroGastrodia elata tuber 59.41
JuvenJuvenile tuber38.95
Mother_GastroMother tuber of Gastrodia elata 21.61
Mother_JuvenMother tuber of Juvenile 18.01