Gene detail

Detail information of GWHGAAEX013869/evm.TU.scaffold_54.73

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|224368496\|ref\|YP_002602659.1\|	4.00E-68	putative glucosyltransferase family protein [Desulfobacterium autotrophicum HRM2]
nr	gi\|743764044\|ref\|XP_010912224.1\|	0	PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9LZR3\|CSLA9_ARATH	0	Glucomannan 4-beta-mannosyltransferase 9
trEMBL	tr\|M0S9L7\|M0S9L7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P20260_001}
TAIR	AT5G03760	0	Nucleotide-diphospho-sugar transferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000059	2009420	2017284	+

Transcript Sequence
>GWHTAAEX013869 GCGGAAAGCAAAAGTGACAAAATTATGTAAACATTGACAAAATGCCAAAAACCCTCCGCTAATTATGGCATTTTCTTCGGCTATTTTCGCAATTTAGTTGCCGCTTAGCTTTATATTTAAAGATAATCTCTTACTTTGATATATTTTTATCTTAATTATTTTAGGAATTATAGCATCTTATTTATTTTAAGAATGTCGTGACAATGCTCTCATCACTGTTCACACCATCAAAGTTTTTAAATATAGTATTTAATACATATTAATAATCAAAATCATAATTATAAAGTTCATTAAAACCAATAATTTGAAGCTGAATTCGCTCTTGCTGAAATCCTAAATTGATAAGAGCTGGCTAGCTCGATGAGCTGACTCGACTCGAATTCGACTTAAAGCCAGCTCTGCAGCCAATAAATAAGACTCGAACTCGACTTTAAGAATCAAAATTCACCTCATTTATAAAGAATGTTAACTTGAGCTTAACAACAAGTATTAAAGAGACATCTCTATGCTAATATGATCCAACCACCACTATTCAACATAATTAGATTTAACCCTAATGCTTGGATTAAGAACTAAGGTTTAGGCAACATTTGTGGTTTTGACTGGTAAATGTCAATGTATTAATTTGTTAATACAAAACATTGAGAAATTTGCAATTTTATATTTGGCTTTGTGCATTTTGCACACTTTTTGACGCTGCGGGTTAGATTAACTCTTTTCTTTAAGCTATTAATTATTTTTAATGGATTTATTATAGTAAATTAAAATTTGATTTAGAAAATTTAAGTATTTTTTTAATACATAAAAAAAGAAATAGTAATCGGCCGGTGTTTGTCTCGGTTCGGGGGGAGCTATCAGGAGAATTGAGTCCTCGCCTCCGCCCCCCTTTATATTTATTCCAGTGGTTGGACTGTCTCCGCAGATCTCAGCGCGGGAGAGAGCTCCAGCAAACCCTAGTCCTCCGCTCTTCTTCTTCGTCATTTCTTAGATCGGATGAGCGATTGACACTCCACCAGCTCCGCATTGCAATCCCCTTGGGAGATCTCTCTCTGTAATTGAGGAATGGAGGACGACATTGCCGGCCAGATCGGGCTGATTTGGTATCAGGTGAAGGCTCCCGTGATCGTTCCCCTGCTTCGAGCATCCGTCTTCCTCTGCCTGGTGATGTCCGTCATGCTCTTCGCTGAGAAGCTCTACATGGCGGCGGTGGTTCTCGGGGTGAAGATCTCAGGCCGCCGCCCTCGCAGGCGCTACAGATGGGAGCCATTGGGGGACGATCCCGAGCTCGGAACCTCCGCTTTCCCCCTCGTCCTCGTTCAGATCCCAATGTACAACGAGAAGGAGGTCTACAAGCTGTCGATCGGGGCTGCTTGCGGGCTGTCCTGGCCGCCGGATCGGCTGATCGTCCAGGTGCTGGACGATTCGACGGACCCGATCGTCAAGGATCTGGTGGAGATGGAGTGCATGAGATGGGCGGGAAAGGGGATTGATGTGAGGTACGAAGTGAGGAGCAGCAGGAGCGGGTACAAAGCCGGAGCCCTCAAGGAAGGAATGAAGTGCGCCTACGCTAAGAACTGCGAATTCGTCGCAATCTTCGATGCCGATTTCCAGCCGGAGCCGGATTTCCTCTGCCGCGCCGTTCCATTCCTCGTTCATAACCCCCAGCTTGGCCTCGTCCAGGCTCGCTGGAAATTCGCGAACTCGAACGAGTGCCTGATGACGAGGATGCAGGAGATGTCTCTGGACTACCATTTCACAGTGGAGCAGGAGGTCGGCTCCTCTATGCATTCCTTCTTCGGCTTCAACGGGACCGCCGGGGTTTGGAGAATTTCCGCTCTAAGCGAAGCCGGCGGATGGAAGGATCGCACCACCGTGGAGGACATGGATCTCGCCGTCCGAGCGAGCCTCAAAGGCTGGAAATTCCTTTACCTCTCCGATCTCAAGGTCAAAAATGAACTTCCGAGCACCCTCAAAGCATACAGGTACCAGCAACACCGGTGGTCCTGCGGCCCCGCGAACCTGTTCAGAAAGATGCTTCTGGAGATCATCAGAAACAAGAAAGTGTCGCCGCTGAAGAAGGCGCATGTGATATACAACTTCTTCTTCGTCCGGAAAATCGTCGCCCACATCGTGACGTTCGTGTTCTATTGCATGGTGATACCGGCGTCGGTTTTGGTTCCCGAAGTGCAGATTCCCAAGTGGGGGTCTGTCTACATCCCCTCCATGATCACCCTCCTCAATGCCGTCGGAACTCCGCGGTCGCTCCATTTGGTCGTCTTCTGGATCCTATTCGAGAATGTGATGTCACTGCATAGGACGAAGGCCACCTTCGTAGGCCTTCTGGAGACCAGCAGGGTCAATGAGTGGGTAGTCACCGAGAAACTCGGGGACGCCCTCAAGGCCAAGCCCGCCGCAGCCACCACAAAGAAACCTCCTAGACTCAGGATCGGGGACCGGCTGCATGTGTGGGAGGTAGGGGTGGGAGCATTCTTGTTCTTCTGCGGATGCTACGACGCCGGATTCGGGAACAACCACTACTTCATATATCTATTCCTCCAAGCCCTCGCATTCTTCACCGTCGGTTTCGGATACGTCGGAACTCTGGTCCCCCGCACGTAAATCTCTCAGTTTGCTCCATCGCTTGCGTGCTTTAGTTATTCTGTGAATATATCGGTTTGGCAGGAGAGGAAGAACTAAAGGGAGCGCTGGGTAGTATTAATTATATAATCAAATGCTTCCGGATTGATTTGTTTTGTTTCTTCTTCTTTTATTTAAATTGAACAACGACGATGAAGGCAACAAAAACGGCGAATAAGAAGATAGCCTGGATCACCGCATTGCGCATCGGTTCTTCGATTTATTCATGCTGGGGCTGATGAAGCAGTTTGCAGGTGTCCGGAATTCGTCATCTTTGTAATCTTTAGGGTTTAGGCTTTGTTTTGTTATAATCGGATGCAGTTTTGCTCTTTCTTTCCTCTTTGTTTGCTCTAATGTCTATACAGAACAGATTCCTCATTGCCATAATGATCAGCCAAATCTTTAATATTATATTTAGTCAACAAGCCCGAATGAAAAGACCTGCAGAGCAGAATGATGGGCTTTTCATTATTTTGCATCTTCAGCTAATAACCACATAATCATAATTAAATCCTATAATTACAGAGAATTAATTTTGTTAAAGTCGCTAATAGTTTGTGCAGCAGCATCAATCCCTCTACCTTTTCTTCTACTAAAATTATGATTATAACTGTATTAAATATACTTTGATGCTTAAAATAACTTTTCT

Network for GWHGAAEX013869

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13641.5	Glyco_tranf_2_3	83	316	1.00E-21

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.690
SRP064423	SRR2545915	Juvenile tuber	63.220
SRP108465	SRR5643513	five period of Gastrodia elata	42.420
	SRR5643514	five period of Gastrodia elata	59.580
	SRR5643515	five period of Gastrodia elata	59.190
	SRR5643524	five period of Gastrodia elata	59.820
	SRR5643525	five period of Gastrodia elata	38.750
	SRR5643528	five period of Gastrodia elata	20.470
	SRR5643658	five period of Gastrodia elata	92.280
	SRR5643659	five period of Gastrodia elata	95.480
	SRR5643660	five period of Gastrodia elata	78.850
	SRR5643661	five period of Gastrodia elata	99.110
	SRR5643662	five period of Gastrodia elata	67.400
	SRR5643663	five period of Gastrodia elata	65.250
	SRR5643664	five period of Gastrodia elata	30.060
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	41.860
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	28.160
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	52.280
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	31.540
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.200
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.520
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	52.510
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	32.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	103.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	85.540
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	46.470
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	46.470
SRP279888	Gastro	Gastrodia elata tuber	25.42
	Juven	Juvenile tuber	52.13
	Mother_Gastro	Mother tuber of Gastrodia elata	4.63
	Mother_Juven	Mother tuber of Juvenile	14.88