Detail information of GWHGAAEX013888/evm.TU.scaffold_54.94
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|192358876|ref|YP_001982125.1| | 7.00E-21 | serine/threonine protein kinase PpkA [Cellvibrio japonicus Ueda107] |
| KOG | KOG0610 | 8.00E-141 | Putative serine/threonine protein kinase |
| nr | gi|672109065|ref|XP_008788318.1| | 3.39E-166 | PREDICTED: protein kinase G11A [Phoenix dactylifera] |
| Swissprot | tr|Q0DCT8|G11A_ORYSJ | 3.00E-137 | Protein kinase G11A |
| trEMBL | tr|A0A067KEU0|A0A067KEU0_JATCU | 2.00E-158 | Uncharacterized protein {ECO:0000313|EMBL:KDP34711.1} |
| TAIR | AT3G44610 | 8.00E-141 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000059 | 2601620 | 2604622 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013888
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 49 | 202 | 1.70E-33 |
| PF00069.24 | Pkinase | 259 | 362 | 9.60E-22 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.830 |
| SRR2545915 | Juvenile tuber | 2.280 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 28.150 |
| SRR5643514 | five period of Gastrodia elata | 19.630 | |
| SRR5643515 | five period of Gastrodia elata | 18.080 | |
| SRR5643524 | five period of Gastrodia elata | 17.690 | |
| SRR5643525 | five period of Gastrodia elata | 21.510 | |
| SRR5643528 | five period of Gastrodia elata | 29.220 | |
| SRR5643658 | five period of Gastrodia elata | 19.590 | |
| SRR5643659 | five period of Gastrodia elata | 5.930 | |
| SRR5643660 | five period of Gastrodia elata | 8.790 | |
| SRR5643661 | five period of Gastrodia elata | 9.970 | |
| SRR5643662 | five period of Gastrodia elata | 9.560 | |
| SRR5643663 | five period of Gastrodia elata | 9.610 | |
| SRR5643664 | five period of Gastrodia elata | 9.860 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 30.720 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 51.650 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 35.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.550 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.490 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.030 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.420 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.900 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.320 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 23.850 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 63.920 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 63.920 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.20 |
| Juven | Juvenile tuber | 15.99 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 31.94 | |
| Mother_Juven | Mother tuber of Juvenile | 23.18 |