Gene detail

Detail information of GWHGAAEX013900/evm.TU.scaffold_54.107

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|479131778\|ref\|YP_005071738.1\|	8.00E-132	cell division protein FtsZ [Arthrospira platensis NIES-39]
nr	gi\|565344033\|ref\|XP_006339123.1\|	0	PREDICTED: cell division protein FtsZ homolog 2-1, chloroplastic-like [Solanum tuberosum]
Swissprot	tr\|O82533\|FTZ21_ARATH	0	Cell division protein FtsZ homolog 2-1, chloroplastic (Precursor)
trEMBL	tr\|Q95DV5\|Q95DV5_TOBAC	0	FtsZ-like protein {ECO:0000313\|EMBL:CAC44257.1}
TAIR	AT3G52750	0	Tubulin/FtsZ family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000059	2904296	2933391	+

Transcript Sequence
>GWHTAAEX013900 ATGGCCATGCACATGCCGTTTGTATCTTCATTCGATGCTCCTAGTTGTGCTCAAATGTTTGTTTTTTCTGGCGGAGGAATACTATTGACCGATGGAGCAGGCAAAAGCTTCTCAGCCAATTTTTGCCACGGATGTAAAATCCCTTTAGGCTTTGGGCAGAGAGGAAGCTTCGTTGCCACCAGCAATGCTAGAGTGAGACGTTGTTCAAATTCTCACATTATGAAATATAAGAAGAATGATCCTTTCGTGAATTTGCATCCCGAGGTTTCAATTCTTCGAGGGGAGGAGAATAGCACCTTTCTTAACCCCAGGAAGGACACTGCAAGCGAAATTTTTCACGAGGAAGTGATCGACTCAGCTCATCTTAAAGACGATAATGCAGCTACAATAAAAGTTGTTGGAGTTGGTGGTGGAGGGTCTAATGCGGTCAATAGAATGATTGAGAATTCCTTGGATGGTGTGGAGTTCTGGATTGTGAATACTGATGTTCAAGCCATGAGGATGTCTCCAGTTGATCCCGAGCATCGTTTGCCGATTGGGCAAGAGCTAACAAGGGGTCTGGGTGCTGGTGGGAATCCAGATGTTGGCATGAATGCTGCCAAGGAAAGCAAAGATTCAATAGAGCAGGCTATGCAAGGCGCAGATATGATTTTTGTAACTGCTGGGATGGGTGGAGGAACTGGAACTGGGGGTGCTCCTGTGGTTGCTGGAATTGCAAAGTCAATGGGCATACTAACTGTTGGTATAGTCACGACTCCTTTCTCATTTGAGGGACGAAAACGGGCTGTTCAAGCACAGGAGGGAATTGCAAATCTAAGGGACAATGTTGATACACTCATTATTATCCCAAATGATAAGCTGTTAACTGCAGTTTCTCCAAGTACACCTGTGACGGAAGCATTTAATCTGGCAGATGATATACTAAGGCAATGTGTTCGTGGCATTTCAGACATAATCACGGTTCCTGGTTTGGTTAACGTTGATTTTGCTGATGTGCGAGCCATAATGGCAAATGCTGGGTCATCTTTAATGGGCATTGGAACTGCAACTGGAAAAACTAGGGCAAGAGATGCTGCATTAAATGCCATCCAATCACCATTGCTTGACATAGGCATTGAAAGGGCTACTGGAATCGTATGGAATATCACTGGAGGTTGTGATTTAACTTTGTATGAGGTAAATGCTGCAGCAGAAGTAATTTATGATCTTGTTGATCCAAGTGCCAATTTGATATTTGGAGCGGTTATAGATCCTTCAATTAGTGGTCATGTGAGCATAACCTTAATTGCAACCGGCTTCAAACGCCAGGAAGAAGCAGATGGCCTCACCTCAACGGGCAAGAATGTGGGCACCGGCGGGCGTCCTCTCTCAAAAGGAACGGCATTCGAGATTCCGGAGTTTCTACGAAAGAAAGGACGATCACGCTATCCAAGTGCTTCTTAA

Network for GWHGAAEX013900

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00091.24	Tubulin	130	290	1.10E-37
PF12327.7	FtsZ_C	340	434	4.80E-30

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K03531	ftsZ	Cell cycle - Caulobacter	map04112

Gene Ontology

GO term	Ontology	Name
GO:0005525	Molecular Function	GTP binding
GO:0003924	Molecular Function	GTPase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	57.890
SRP064423	SRR2545915	Juvenile tuber	64.880
SRP108465	SRR5643513	five period of Gastrodia elata	60.810
	SRR5643514	five period of Gastrodia elata	69.230
	SRR5643515	five period of Gastrodia elata	70.420
	SRR5643524	five period of Gastrodia elata	58.380
	SRR5643525	five period of Gastrodia elata	59.610
	SRR5643528	five period of Gastrodia elata	61.150
	SRR5643658	five period of Gastrodia elata	61.130
	SRR5643659	five period of Gastrodia elata	71.900
	SRR5643660	five period of Gastrodia elata	71.310
	SRR5643661	five period of Gastrodia elata	72.190
	SRR5643662	five period of Gastrodia elata	86.150
	SRR5643663	five period of Gastrodia elata	83.640
	SRR5643664	five period of Gastrodia elata	84.890
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	66.340
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	53.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	66.320
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	67.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	52.020
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	44.820
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	61.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	57.950
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	65.180
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	59.060
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	67.640
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	67.640
SRP279888	Gastro	Gastrodia elata tuber	61.70
	Juven	Juvenile tuber	51.28
	Mother_Gastro	Mother tuber of Gastrodia elata	31.87
	Mother_Juven	Mother tuber of Juvenile	30.58