Detail information of GWHGAAEX013906/evm.TU.scaffold_54.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|674962991|emb|CDX70994.1|2.13E-31BnaC03g10780D [Brassica napus]
trEMBLtr|A0A078C497|A0A078C497_BRANA8.00E-32BnaC03g10780D protein {ECO:0000313|EMBL:CDX70994.1}
TAIRAT5G222805.00E-32Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005931388833166959+
Transcript Sequence

Network for GWHGAAEX013906

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.780
SRR2545915Juvenile tuber20.500
SRP108465SRR5643513five period of Gastrodia elata20.800
SRR5643514five period of Gastrodia elata20.650
SRR5643515five period of Gastrodia elata14.900
SRR5643524five period of Gastrodia elata19.170
SRR5643525five period of Gastrodia elata28.890
SRR5643528five period of Gastrodia elata28.500
SRR5643658five period of Gastrodia elata23.250
SRR5643659five period of Gastrodia elata17.190
SRR5643660five period of Gastrodia elata19.890
SRR5643661five period of Gastrodia elata19.800
SRR5643662five period of Gastrodia elata20.800
SRR5643663five period of Gastrodia elata22.460
SRR5643664five period of Gastrodia elata20.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.940
SRR6049655Rhizomagastrodiae_C368-T10_good_13.870
SRR6049656Rhizomagastrodiae_C368-T07_good_118.610
SRR6049657Rhizomagastrodiae_C368-T07_good_120.900
SRR6049658Rhizomagastrodiae_C368-T04_good_120.240
SRR6049659Rhizomagastrodiae_C368-T04_good_113.570
SRR6049660Rhizomagastrodiae_C368-T01_good_19.390
SRR6049661Rhizomagastrodiae_C368-T04_good_115.990
SRR6049662Rhizomagastrodiae_C368-T01_good_132.350
SRR6049663Rhizomagastrodiae_C368-T01_good_111.820
SRR6049664Rhizomagastrodiae_C368-T10_good_126.430
SRR6049665Rhizomagastrodiae_C368-T10_good_126.430
SRP279888GastroGastrodia elata tuber 29.12
JuvenJuvenile tuber22.67
Mother_GastroMother tuber of Gastrodia elata 20.65
Mother_JuvenMother tuber of Juvenile 14.82